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Mutant Lines
16-1985-1

16-1985-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 16100332 [Map]; Strand: c
- AT4G33460.1 - [+] show detail - ABC transporter family protein
  Distance: -66; Region: promoter
- AT4G33465.1 - [+] show detail - SCR-like 22
  Distance: -426; Region: promoter

AATCCAAGCC AGTCCGGTTT TCAAATCGAT ATCATCCGGT TCGGTTTGAT 
ACGGTTTGAG GTTTATTTCG AATTTTATTT CGGTTTTCTA GTGCCGACGT 
TACGGTATAA TTTGAAGCTG AGCGTTTAAA TTTCGAAATC ACATGTAATC 
ATGAATTTGC TTTCGAAATT TAATAATTGG GATTTGACTC ACAAAAAATT 
AACCATCAAA ATTATTTATA TAACAAAATA AATAAATAAA AAAGGAAAAA 
TAGCAGTGAA ATATTGAATT TTAGTAAGAA TTTAAAAAAA TTGGAAGCCT 
ATTCTGCCTA TCTTGTTGAC TTGGCTCCAT CTTATGTTTT TCCTCTCAAA 
TTTATCGGAA CAATTATTTG GTTGTGTGGT TCCAACTAAA TAAGCGAATA 
TATTTATCAC GAGAGTCAGA CAAAATTTGG TTAAATTTTT CCAAGTAATA 
GAGAATATAT ATCATCAGTT TTTGAAGCAT GGGGATGTGG TGTACTACTT 
TGTTTATGGT TTCTTGTGTT TCCATCTATT TAATTCTAAG CCATGTTCAA 
GGTATTATAT TAAACTCTTT TTTATTGACT GTTTGCAATT TGCAATCACC 
AAAAGAATTG TTGCAAACAA AGAAGAAAAG CAGCTCTAGA ACATGTCGAC 
GCAATTAAAA ACTATATGGT ATTACTAATT TTCTTATATC TNTAAACTAA 
CAATTNGNTT TGGNTGATGA CAAATTTNNA GGTTNAAGCT GGAGCACNTT 
CCCAAGACT

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 16100216 [Map]; Strand: c
  - AT4G33460.1 - [+] show detail - ABC transporter family protein
    Distance: 0; Region: exon1 (5UTR)
  - AT4G33465.1 - [+] show detail - SCR-like 22
    Distance: -542; Region: promoter
Flanking Genome Sequence: 16-1985-1 - 5-prime edge
```
CTTGGATTGA ACAAGCGAAG CAACGAGAGA AAGTATCTAC GGTTTCTCTG 
TTGCTTGTAT TTTTTGTGTG TCGATTCGAC GAAGCT
```

AT4G33460.1

Model type: Protein coding
Short Description: ABC transporter family protein
Curator Summary: member of NAP subfamily
Computational Description: ATNAP13; FUNCTIONS IN: transporter activity; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 12 (TAIR:AT1G02530.1); Has 407040 Blast hits to 369976 proteins in 3957 species: Archae - 7271; Bacteria - 322720; Metazoa - 9258; Fungi - 6631; Plants - 5055; Viruses - 23; Other Eukaryotes - 56082 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G33465.1

Model type: Protein coding
Short Description: SCR-like 22
Curator Summary: Encodes a member of a family of small, secreted, cysteine rich proteins with sequence similarity to SCR (S locus cysteine-rich protein).
Computational Description: SCR-like 22 (SCRL22); INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant self-incompatibility response (InterPro:IPR010682); BEST Arabidopsis thaliana protein match is: SCR-like 23 (TAIR:AT4G14785.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR