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16-2011-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 359339 [Map]; Strand: c
      • AT5G01910.1 - [+] show detail - unknown protein; Has 66 Blast hits to 66 proteins in 27 species: Archae - 0; ...
        Distance: -540; Region: promoter
      • AT5G01910.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -540; Region: promoter
      • AT5G01920.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-2011-1 - 3-prime edge 
    GTTGTATGAT GAGATGCAGT TTTTCTCCGC AGGACATTCC TGTTGATTCC 
    CTCTCTCATC TCCCTCCTTT CCTTGACTTT CAGAACTCCC TCGCCACATT 
    TTCGGATACC CAGAAATGGG GGTTCTTTGT CTCCGCCGGA ATCGTCTGGT 
    TTTACCTCAC GGCGAGGCCT GGTGTTCTTA TCGGCGCCAT TGACGCCTAC 
    CTTCTCGCTC CCCTCCAGCT TGGCCTCGAC ACTCTGATTG GAAGGAGGTT 
    GAAGANGTCC GATTTCTTGG TCACTGANAA ACTCGGCGAA NGCTNTTTCG 
    GCGTCGTCTA TGCCGGNGTN CTACTNCCCA ANAATTACA

AT5G01910.1

Model type
Protein coding
Computational Description
unknown protein; Has 66 Blast hits to 66 proteins in 27 species: Archae - 0; Bacteria - 2; Metazoa - 18; Fungi - 7; Plants - 29; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G01910.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G01920.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Curator Summary
Chloroplast thylakoid protein kinase STN8 is specific in phosphorylation of N-terminal threonine residues in D1, D2 and CP43 proteins, and Thr-4 in PsbH protein of photosystem II. Phosphorylation of Thr-4 in the wild type required both light and prior phosphorylation at Thr-2.
Computational Description
STN8; FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: photosystem II stabilization; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, core (InterPro:IPR000719), Serine/threonine protein kinase-related (InterPro:IPR017442), Protein kinase-like (InterPro:IPR011009), Serine/threonine protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: STN7 (Stt7 homolog STN7); kinase/ protein kinase (TAIR:AT1G68830.1); Has 33057 Blast hits to 33030 proteins in 1682 species: Archae - 26; Bacteria - 4053; Metazoa - 14243; Fungi - 4538; Plants - 3212; Viruses - 96; Other Eukaryotes - 6889 (source: NCBI BLink).
Link
InterPro Scan - TAIR