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16-2062-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8788939 [Map]; Strand: c
      • AT1G24909.1 - [+] show detail - Glutamine amidotransferase type 1 family protein
        Distance: -1025; Region: intergenic
      • AT1G24938.1 - [+] show detail - transposable element gene
        Distance: 437; Region: intergenic
    2. Chromosome: 1; Position: 8811468 [Map]; Strand: c
      • AT1G25083.1 - [+] show detail - Glutamine amidotransferase type 1 family protein
        Distance: -1025; Region: intergenic
      • AT1G25097.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 437; Region: intergenic
    Flanking Genome Sequence: 16-2062-1 - 3-prime edge 
    ATTTTGGATG CTTTGACGCA GATTCATTCA TGGCTTCCAG GTCTTTTATT 
    ACTTCATTAG TTGTTGACTT AAAGAAATAT ATCTAAGTAA CGTTTAATGA 
    TGTGGGGGAT ATTAAGCAGC CAGGTTTTAC ACTCAGCTAT AGTCATCTTT 
    TCGTATAAGC ATCTAATTCG ACAAATGTAT AGTATAGTCA TCTTTTCGTA 
    TAAGCATATA TAGTATAGTC ATCGTATAAG CATATATACC GTTTTCAATT 
    TAATAGTCAC ACCATCCTTT CTGAAAAAGA AAAAATATAT ATCATTAAAC 
    AAGCT

AT1G24909.1

Model type
Protein coding
Short Description
Glutamine amidotransferase type 1 family protein
Computational Description
Glutamine amidotransferase type 1 family protein; FUNCTIONS IN: catalytic activity, anthranilate synthase activity; INVOLVED IN: glutamine metabolic process, biosynthetic process, metabolic process; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), Anthranilate synthase, glutamine amidotransferase domain (InterPro:IPR006221), Carbamoyl phosphate synthase, GATase domain (InterPro:IPR001317), Glutamine amidotransferase type 1 (InterPro:IPR017926), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); BEST Arabidopsis thaliana protein match is: Glutamine amidotransferase type 1 family protein (TAIR:AT1G25083.1); Has 23967 Blast hits to 23967 proteins in 3339 species: Archae - 582; Bacteria - 15663; Metazoa - 561; Fungi - 667; Plants - 197; Viruses - 0; Other Eukaryotes - 6297 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G24938.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G35100.1)
Link
InterPro Scan - TAIR

AT1G25083.1

Model type
Protein coding
Short Description
Glutamine amidotransferase type 1 family protein
Computational Description
Glutamine amidotransferase type 1 family protein; FUNCTIONS IN: catalytic activity, anthranilate synthase activity; INVOLVED IN: glutamine metabolic process, biosynthetic process, metabolic process; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase class-I, C-terminal (InterPro:IPR000991), Glutamine amidotransferase superfamily (InterPro:IPR011702), Anthranilate synthase, glutamine amidotransferase domain (InterPro:IPR006221), Carbamoyl phosphate synthase, GATase domain (InterPro:IPR001317), Glutamine amidotransferase type 1 (InterPro:IPR017926), Anthranilate synthase component II/delta crystallin (InterPro:IPR006220); BEST Arabidopsis thaliana protein match is: Glutamine amidotransferase type 1 family protein (TAIR:AT1G24909.1); Has 23967 Blast hits to 23967 proteins in 3339 species: Archae - 582; Bacteria - 15663; Metazoa - 561; Fungi - 667; Plants - 197; Viruses - 0; Other Eukaryotes - 6297 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G25097.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24822.1); Has 12 Blast hits to 12 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR