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16-2138-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8913820 [Map]; Strand: w
      • AT1G25400.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -1178; Region: intergenic
      • AT1G25410.1 - [+] show detail - isopentenyltransferase 6
        Distance: 371; Region: intergenic
    Flanking Genome Sequence: 16-2138-1 - 5-prime edge 
    TAGATATCTA TCTATTACTC TCTCTCTCTC TCACTCAATC TTTACTGACT 
    CCTGTATTTT TATCCCTATC AGANTGTCGT ATTAATATTA TTNTGTATTN 
    TACTGNNGAC TTATCACTAT GATAAAATCA TAATATATAT CTCATCATGT 
    NGCNNGGGAT TGTAGNACAA ACTACCAGTA TCATTAAACA TCATCATATA 
    TCCCTTTTTT TAACTNCCCT TATTATTATG AATTTNTGCG ATCTAGATAC 
    AATATGTTTC AACTCTNGGC ACTACAAGCA TATATGTATA AGTNNGGGGG 
    AGTTCATATG AGTAGACATC GNGGAGATCA GGAGGAAGAT ATGCTCTTGT 
    ATGACTTTTA TTCTCAAATC TAGACATCAA ACATGATTTA AAAGACAAAC 
    ACACACACGT ACATNTGNTG NTGTATAACN GGGAAAAACA GACTAAACTT 
    CCAACAAAAA CTTCNTGACA ATCTNGACAC TTTCATCCAC ANTGTGTTTT 
    TCCCAAATCT CTCTCCCATT CTTTCCTTCT CCCTNTGCCG NACTTTGATT 
    CAGCTCAGCC ATAANTGCCG CCGTAGCGTC AAGCCTNTTA ATCTCCCAAC 
    CACCTCTTAT CAGCTNCANG ATCTTCTCTT TNTGCTTCTT CACCAACCGA 
    CATGTNCTCT TTTTNATCCC CTTCACTGNC TCCTNGNACG CCGCCTTTCT 
    CGCTAAGNCC AAATNCCCNG N

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8913665 [Map]; Strand: w
      • AT1G25400.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -1023; Region: intergenic
      • AT1G25410.1 - [+] show detail - isopentenyltransferase 6
        Distance: 526; Region: intergenic
    Flanking Genome Sequence: 16-2138-1 - 3-prime edge 
    GATATCTATA TACTTTACAC ACAGTGAGCC AAAATACTCT CCCAAACATT 
    TGAGTATAAT ATGGATTCCA CAAATGCCCT AACTTATGAA GTAGATGTTG 
    AAGTTGAATC TTACCGAGAG TTTTATTTAT GTATCGGTTG GTTGAATTAA 
    TGTATGTTTT CAAAACATAT ACCTCCATAA CAACATCTCG A

AT1G25400.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68440.1).
Link
InterPro Scan - TAIR

AT1G25410.1

Model type
Protein coding
Short Description
isopentenyltransferase 6
Curator Summary
AB061404 Arabidopsis thaliana AtIPT6 mRNA for cytokinin synthase, complete cds
Computational Description
isopentenyltransferase 6 (IPT6); CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: isopentenyltransferase 1 (TAIR:AT1G68460.1); Has 7248 Blast hits to 7187 proteins in 2504 species: Archae - 0; Bacteria - 4974; Metazoa - 135; Fungi - 135; Plants - 290; Viruses - 0; Other Eukaryotes - 1714 (source: NCBI BLink).
Link
InterPro Scan - TAIR