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16-2155-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22586160 [Map]; Strand: w
      • AT5G55810.2 - [+] show detail - nicotinate/nicotinamide mononucleotide adenyltransferase
        Distance: 0; Region: intron1 (CDS)
      • AT5G55810.1 - [+] show detail - nicotinate/nicotinamide mononucleotide adenyltransferase
        Distance: 0; Region: intron1 (CDS)
      • AT5G55820.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Inner centromere protein, ARK-binding region (Int...
        Distance: -127; Region: promoter
    Flanking Genome Sequence: 16-2155-1 - 5-prime edge 
    ATCATCATAA GTAACCAAGC AGATCAAATT TACAAAATCA GAATTTTCAC 
    AAAAAAGACA AATGAAGGNA ATCAAAATCG AGAATAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22586044 [Map]; Strand: w
      • AT5G55810.2 - [+] show detail - nicotinate/nicotinamide mononucleotide adenyltransferase
        Distance: 0; Region: intron1 (CDS)
      • AT5G55810.1 - [+] show detail - nicotinate/nicotinamide mononucleotide adenyltransferase
        Distance: 0; Region: intron1 (CDS)
      • AT5G55820.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Inner centromere protein, ARK-binding region (Int...
        Distance: -243; Region: promoter
    Flanking Genome Sequence: 16-2155-1 - 3-prime edge 
    ATGATGATGA GATTCTCACC AGGTTTATTA TTAAAATTCC GTCCGGGTGT 
    TGAATATTTT CGATTGTTTG TCTGAAACAG GGACAAAACT TGTGTAGTGC 
    TTGTGGCAAC TGGGAGTTTC AATCCTCCTA CTTTCATGCA TTTACGCATG 
    TTTGGTCAGT TCTTTTACCA GAGTAGATAT ATAATTCATT TTTTTATATG 
    TTTATCAATG GCGTTTCAGA TTCTATCAAT CCGAAAGTTT TCACAATTTG 
    AGGCATAATG ATCAGTGTTT TGACTCGTTT CAATGGGAAA ATCCAATACT 
    GGTTTATAGT CAAAAGTAGC TTAAGATTAT ATGCCTTGTT GTTTACTTCT 
    TGAGTGAAAC CGTTTCTTGA GTATATGATT GTGTTAGCTT TGTATATTTT 
    GGTTTATAAA ACCGGCATAT GACAAGAATG AACTGCAGAA CTTAGAGGTT 
    TCAATTGTTG ATTCTTGTCC ATTGCTGTGA CCTTTTGTTC AAATGTATAT 
    GTTTCTTTAC ATCAAACTGA TAAGTTCTCT TCCTTTTTTT TGTCGCTAGA 
    GCTGGCGAGA GATGAATTAC GCTCAAAAGG ATTTCATGTT CTTGGAGGAT 
    ATATGTCTCC TGTTAATGAT GCATATAAGA AGAAGGTATT TGTCATCTTG 
    AGAATCTTAG TTTCTTTCCA TAATGACTCT TTTTTTCTGA ACCTATGCTA 
    ATGGACATGT TATGTGTGAT GAAACTAANA GCTCTTTTTC TTTTTANCTN 
    CCAAAG

AT5G55810.1

Model type
Protein coding
Short Description
nicotinate/nicotinamide mononucleotide adenyltransferase
Curator Summary
encodes a bi-functional enzyme that expresses both nicotinamide-nucleotide adenylyltransferase (2.7.7.1) and nicotinate-nucleotide adenylyltransferase (2.7.7.18)activity.
Computational Description
nicotinate/nicotinamide mononucleotide adenyltransferase (NMNAT); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Probable nicotinate-nucleotide adenylyltransferase (InterPro:IPR005248), Cytidylyltransferase (InterPro:IPR004820); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G55810.2

Model type
Protein coding
Short Description
nicotinate/nicotinamide mononucleotide adenyltransferase
Curator Summary
encodes a bi-functional enzyme that expresses both nicotinamide-nucleotide adenylyltransferase (2.7.7.1) and nicotinate-nucleotide adenylyltransferase (2.7.7.18)activity.
Computational Description
nicotinate/nicotinamide mononucleotide adenyltransferase (NMNAT); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Probable nicotinate-nucleotide adenylyltransferase (InterPro:IPR005248), Cytidylyltransferase (InterPro:IPR004820).
Link
InterPro Scan - TAIR

AT5G55820.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Inner centromere protein, ARK-binding region (InterPro:IPR005635); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR