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Mutant Lines
16-2172-1

16-2172-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 5; Position: 2270987 [Map]; Strand: c
- AT5G07225.1 - [+] show detail - RING/U-box superfamily protein
  Distance: -760; Region: promoter
- AT5G07230.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
  Distance: 0; Region: exon1 (5UTR)
- AT5G07240.1 - [+] show detail - IQ-domain 24
  Distance: -932; Region: promoter

ATAAATATAG ATGATGGAAT TCACCAATCC AAAAGTGAAT AAAAAACACA 
AGTACAAACA ATATAGTATC TAATTAGAAT GGTATCTCTA AAGTCCCTTG 
CTGCTATTCT CGTTGCCATG TTTCTTGCCA CCGGACCTAC GGTTCTAGCC 
CAGCAGTGCA GAGACGAACT GAGCAATGTG CAGGTGTGCG CGCCGCTGCT 
TCTGCCCGGT GCGGTCAATC CTGCCGCGAA CTCAAATTGC TGCGCTGCCC 
TCCAAGCAAC TAACAAAGAT TGTCTATGTA ACGCTCTTCG AGCAGCCACC 
ACACTTACCT CTCTTTGTAA CCTCCCCTCT TTTGATTGTG GTAAGATGAT 
CCATCGATTA AAACCTTTTT TACTAGATTT TTATAAATTA TTCCATCAAT 
AGTGTTTGTT TTATATTTGT TCTCATGATT TTTTGGACTT ATGTTTTGTG 
AACTGTGCAG GCATAAGTGC CTAGTTGAAC AACATTCAGT TCCGAGGATT 
TGGGGAGTTT GGTCTGCAAA CGACAAGACG AATAAAATAA AATAATGAGA 
AATACACTAT TTANTGTTTT GTTTTGAATT TGGTTTGTTC AATACTTATG 
ACAGATCACC ANCCCGGGCC GTNNACCACN CGGNNCCNNT NA

AT5G07225.1

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G52140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G07230.1

Model type: Protein coding
Short Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sepal, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT5G62080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G07240.1

Model type: Protein coding
Short Description: IQ-domain 24
Computational Description: IQ-domain 24 (IQD24); CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 23 (TAIR:AT5G62070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR