1. Home
  2. Mutant Lines
  3. 16-2283-1

16-2283-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 9520138 [Map]; Strand: w
      • AT4G16920.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 16-2283-1 - 5-prime edge 
    GATGNATNTT CACTGNTGAN CAGATAATGG NACACAANAA ACGNGATCTN 
    CCATTGTCGG TACCACAANT GTGCCTCACC TCANCGCCTN GATGACACCT 
    CTACAGTCTG TAAAGTCGGC GACCATTAGA TTTGTCAGTC TGAAAATGTT 
    TGGGGAGATG TTTTTCAACC TCTGGCAACA ATACATCATT AGTTCAGTGA 
    GCCTCGTGAA ATTCTCAATG CAGCAGGGAA CTTCTTCAAT GGCGGTGTTT 
    TCCAGATAGA GACATCCAAT ATTAGTTGAA ATCAGAGGAA AAGTTCTCAA 
    ACTTGAGCAA CCACTGAGAT CGAGGATTAG AAGAAATGAC AAGTTGACAT 
    CGGTTGGAAG AACCTCCAGC CCTGTGCATC TTTTCATGTA CAAACGTCTC 
    AAACTTTGAA GATTCCCAAT TGTAGAAGGA AGTGTCACCA AACTTTTGCA 
    GTTGTTGAGT ATCAAAGACT CGAGATGGGT GGCTTTTGAA AGATCTCAAT 
    TATCTCGTCT GGACATCCAG TGATTGCTGG GAAATTTCTC AAATTCGGGC 
    ATCCAGTGAG ATCNAGGTAC GCGAGAGATT CCAAGTTGAN ATCGGNTGGG 
    AAAACTCTCT ANCTTTTTGC AATCACTCAT ATCTAAATAG ATCANTTTAA 
    TGGCATTTCT GAATTGANGA AGGAAGGGGT CCCCAAANNA TTNGNATNCA 
    GCAAGATNNA ATNTCTCGAG GTTTATGGGT TAAGAAAAGA TNTGGANTTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25666860 [Map]; Strand: c
      • AT1G68450.1 - [+] show detail - VQ motif-containing protein
        Distance: -4621; Region: intergenic
      • AT1G68460.1 - [+] show detail - isopentenyltransferase 1
        Distance: 1750; Region: intergenic
    Flanking Genome Sequence: 16-2283-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTGATATA 
    TGTTTCATTT CTTGGATTGG AATGAAATAA ATAATTGTAT ATAAAGCGTT 
    GTTGACCAGA CCTATATCAA TGGTAAAAAG TTTTGAAAGC AACCCCTGCA 
    GTCTAGAGTT TACGTGCCAA TATTATTGTC TTTGTTTTCT GATCAAGTTC 
    TGTCACAAAT TATGACGCCT TTATGAAATT TCAAACAACA ATGGTGAACA 
    AAGAGAGAAT AATAAATGAG TGATAGAGAA CGATGGAGAA ATTATTGATA 
    TATAATGGAG GAAAAATATA CACTTTGTAT CGCAGTGTAG TTTTACATAA 
    CATTGACTAA ACAAAAAAAT AAGACGAGTT TAAAGTTCTT GGTCCTAAAC 
    CAAGACCACC GTACGTACCA ACCACGTGTA GTATTCACAA ATAATGATCT 
    TTTTATTACA AATTCTGTTC CGTATATCTT ATGTTTTGGT TGCGAATTGT 
    TTATACGTGG TGCATGCACT TAAAACTCAA GAACCATCAA TATCTTTGTG 
    ACGAGAGCTT ATGGATC

AT1G68450.1

Model type
Protein coding
Short Description
VQ motif-containing protein
Computational Description
VQ motif-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT3G18360.1); Has 133 Blast hits to 133 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G68460.1

Model type
Protein coding
Short Description
isopentenyltransferase 1
Curator Summary
Encodes a putative adenylate isopentenyltransferase. It catalyzes the formation of isopentenyladenosine 5'-monophosphate (iPMP) from AMP and dimethylallylpyrophosphate (DMAPP), but it has a lower Km for ADP and likely works using ADP or ATP in plants. It is involved in cytokinin biosynthesis.
Computational Description
isopentenyltransferase 1 (IPT1); FUNCTIONS IN: AMP dimethylallyltransferase activity, ATP/ADP dimethylallyltransferase activity; INVOLVED IN: cytokinin biosynthetic process, secondary growth; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: tRNA isopentenyltransferase (InterPro:IPR002627); BEST Arabidopsis thaliana protein match is: ATP/ADP isopentenyltransferases (TAIR:AT3G19160.1); Has 7944 Blast hits to 7761 proteins in 2606 species: Archae - 0; Bacteria - 5388; Metazoa - 167; Fungi - 152; Plants - 293; Viruses - 0; Other Eukaryotes - 1944 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G16920.1

Model type
Protein coding
Short Description
Disease resistance protein (TIR-NBS-LRR class) family
Computational Description
Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT4G16950.2); Has 33072 Blast hits to 18315 proteins in 784 species: Archae - 24; Bacteria - 2125; Metazoa - 2462; Fungi - 169; Plants - 26873; Viruses - 34; Other Eukaryotes - 1385 (source: NCBI BLink).
Link
InterPro Scan - TAIR