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Mutant Lines
16-2292-1

16-2292-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 1; Position: 4348378 [Map]; Strand: c
- AT1G12750.1 - [+] show detail - RHOMBOID-like protein 6
  Distance: -51; Region: promoter
- AT1G12750.2 - [+] show detail - RHOMBOID-like protein 6
  Distance: -50; Region: promoter
- AT1G12750.3 - [+] show detail - RHOMBOID-like protein 6
  Distance: -50; Region: promoter
- AT1G12760.1 - [+] show detail - Zinc finger, C3HC4 type (RING finger) family protein
  Distance: -120; Region: promoter
- AT1G12760.2 - [+] show detail - Zinc finger, C3HC4 type (RING finger) family protein
  Distance: -120; Region: promoter

ATGAAGAAGA CGACATTGCT TTGACGGGCC TTTAAAAATA TTAAAAGAGA 
GACACATCAA TACCTCGTGG CCCATTTATA TAGACCCCGC TTAATTTTGT 
CTGATTGTTG ACTGTTGACT TTTAGGGACC ACATGAAACT ATTAAATGAC 
TTTTCGGATT TCAAATATTC AATTGAGAGA TATTATTTTC TGTTAGTTTC 
CCTTAATCAT CATCATCGTC TTCATCATCA TCTCTCTCTC TCTCTTCTCT 
TCGTTCCTCT TTCTTTACAC GCTTGAAACC CTAGCAATTC CAATTTCGTT 
TCCTCTAATA GAATCTTCAT CTTTTTATGG CGTAACGTTA CACGAATTTC 
AACGATTTAG GTTTTTTTTT TTTTTTTTTG NAAAAANNNC CCCNAAAAAN 
AAAANNNNNG NCNGGGGNAN CCCCCNGGGN AANNCCCCNN TNNTTCCCNC 
NTTTTTTTTT TTGGNNNNCC CCCNCCCTTN TNANCCCCCC CCNGNNNTTT 
TNANNGGGGA AANNTTTNNN GNNACCCCCN GGGGGGGGGG GGGGGGGGNA 
NNNNAANTTT TNNNNAAAAA NGGGGNNAAA AAANCCCGGG GGGTTTNAAN 
NNCCCCCNNN NGGGGGNCNG GGNGGGGGGN NCCCTTTTTT TTTTGNAAAA 
AACCCCNNGG GGGCCCCCCN NGNNNNNNGA AAAANAAGGG GGNNTTNNNA 
AANCCNGGGG GGGGGCNTNN NTTTNNGNGA AAA

AT1G12750.1

Model type: Protein coding
Short Description: RHOMBOID-like protein 6
Computational Description: RHOMBOID-like protein 6 (RBL6); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like 2 (TAIR:AT1G63120.1); Has 6272 Blast hits to 6271 proteins in 1782 species: Archae - 138; Bacteria - 3818; Metazoa - 537; Fungi - 159; Plants - 344; Viruses - 0; Other Eukaryotes - 1276 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G12750.2

Model type: Protein coding
Short Description: RHOMBOID-like protein 6
Computational Description: RHOMBOID-like protein 6 (RBL6); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like 2 (TAIR:AT1G63120.1); Has 6272 Blast hits to 6271 proteins in 1782 species: Archae - 138; Bacteria - 3818; Metazoa - 537; Fungi - 159; Plants - 344; Viruses - 0; Other Eukaryotes - 1276 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G12750.3

Model type: Protein coding
Short Description: RHOMBOID-like protein 6
Computational Description: RHOMBOID-like protein 6 (RBL6); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: RHOMBOID-like 2 (TAIR:AT1G63120.1).
Link: InterPro Scan - TAIR

AT1G12760.1

Model type: Protein coding
Short Description: Zinc finger, C3HC4 type (RING finger) family protein
Computational Description: Zinc finger, C3HC4 type (RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, zinc ion binding; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT1G63170.1); Has 9873 Blast hits to 9851 proteins in 276 species: Archae - 0; Bacteria - 6; Metazoa - 2638; Fungi - 764; Plants - 5094; Viruses - 23; Other Eukaryotes - 1348 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G12760.2

Model type: Protein coding
Short Description: Zinc finger, C3HC4 type (RING finger) family protein
Computational Description: Zinc finger, C3HC4 type (RING finger) family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: Zinc finger, C3HC4 type (RING finger) family protein (TAIR:AT1G63170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR