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16-2318-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18064760 [Map]; Strand: c
      • AT4G38650.1 - [+] show detail - Glycosyl hydrolase family 10 protein
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: 16-2318-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    GACCAAATAC AATCCCGATT GGGTTCGTAA TCTAACCGGC GAAGATCTCC 
    GGTCGGCGGT TAACCGGCGA ATCAAGAGTC TGATGACTCG GTACAGAGGA 
    GAGTTCGTGC ATTGGGACGT GAGCAACGAG ATGCTTCACT TTGACTTCTA 
    CGAGACTCGA CTGGGGAAGA ACGCGTCGTA CGGATTCTTC GCCGCGGCTC 
    GTGAGATTGA CTCATTGGCG ACTCTGTTCT TCAATGATTT CAACGTGGTG 
    GAGACTTGCA GCGACGAGAA GTCAACGGTT GACGAATACA TCGCGAGGGT 
    GAGGGAACTC CAACGGTACG ACGGCATAAG GATGGACGGA ATCGGTCTCG 
    AGGGTCACTT CACGACGCCA AACGTAGCGC TGATGAGAGC CATCCTCGAT 
    AAACTCGCTA CGCTCCAGCT CCCAATCTGG CTCACCGAGA TTGATATCAG 
    CAGCAGCCTC GACCACCGCT CTCAGGTTCA CAAGTCTCTG TGTTCCGGTT 
    TAGTTCAGTT TGCAATTTGA ATCTGGTTTT GGTTACAATT TTTAGCCGGT 
    TTATTAACGG TTTTTCGAAT TGATTTTGGC TGAAATACGG TATGTCTGTT 
    AGGATGATAA AATCTGGTTG GAGTACACAT TGATTATACT TGGGTGCAAG 
    TAACCGGAAA TTTGTTACGT TTTCAGGCGA TTTATTTGGA GCAGTGTTAC 
    GTGAAGGATT CTCGCACCCA TCGGTAACCG GTATAATGCT NTGGACCGC

AT4G38650.1

Model type
Protein coding
Short Description
Glycosyl hydrolase family 10 protein
Computational Description
Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase family 10 protein (TAIR:AT4G38300.1); Has 2063 Blast hits to 2053 proteins in 438 species: Archae - 10; Bacteria - 1176; Metazoa - 20; Fungi - 357; Plants - 277; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink).
Link
InterPro Scan - TAIR