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Mutant Lines
16-2380-1

16-2380-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 3207786 [Map]; Strand: c
- AT3G10340.1 - [+] show detail - phenylalanine ammonia-lyase 4
  Distance: 0; Region: exon3 (CDS)
- AT3G10350.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
  Distance: -453; Region: promoter
- AT3G10350.2 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
  Distance: -478; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
ACGGAGCTCC GGTTTCAATC TGTTGAAAAT CTTTTTCGAT AGATCTACAT 
CCAAGATTCT TACCAACTTT TTAATCTACT TTACATGATT TGTGTTTTAT 
ATATTTCTTG ATTTCCACGA AAATGAACAT TGTCAAGATC TGAAAACCTA 
TAAGTTGTTT GTTTGTATGT TGAATGCAGT GTCGTTTTAC TATTCTTTTG 
ATCCATTATG ATAAAAAGTC GCAATGGAGT GTTGTTGCTA AGAAGGTGTT 
GGTTGGTATA GTGCCGATTG GACCAATTTG AGTCTAAGAC ACAGTTTTTG 
GTCTGGACAC ATAATTTGTG TATGCAGTTT CAAAACGTGT TTTAATCTCA 
TGCTTGGATA CAAAAAATTA GAGAAGAAAT CTTCATTTTG GGAAAAAGAG 
ACGAATTTGG GGACTAGTTA CTTATTTAAT AAAGAGTGTT GTTGGGAGCA 
AAAACAGGGA GATAAATAGT TTCTCGGCAC CGCTTCTTTG TATAGCACAG 
AAGTGAAGAG CAAGCAGACG AAAAAAATGG CGACTCTGTC TTCCTATCTG 
TTATCTTCTC CTCCTCTATG CAAATCCCGA TTCTCGGCAA CAAGTCTCGT 
CTCAGGAATT GATTTCATCT NTTTCTNTCC TNNACAACTN TNTCCTNNTN 
ATNCACTGTN TTGCCGGNGA TTCTTTNTNT TTCCGNTNAA CATNNTNNNC 
GGANAACTNN CTTNANGGGT NNAATTACCA NNNNGGC

AT3G10340.1

Model type: Protein coding
Short Description: phenylalanine ammonia-lyase 4
Curator Summary: Encodes PAL4, a putative a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).
Computational Description: phenylalanine ammonia-lyase 4 (PAL4); FUNCTIONS IN: ammonia-lyase activity, catalytic activity; INVOLVED IN: L-phenylalanine catabolic process, biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase (InterPro:IPR001106), Phenylalanine/histidine ammonia-lyases, active site (InterPro:IPR022313), L-Aspartase-like (InterPro:IPR008948), Phenylalanine ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis thaliana protein match is: PHE ammonia lyase 1 (TAIR:AT2G37040.1); Has 4898 Blast hits to 4876 proteins in 1415 species: Archae - 40; Bacteria - 2975; Metazoa - 80; Fungi - 127; Plants - 1177; Viruses - 0; Other Eukaryotes - 499 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G10350.1

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: chloroplast stroma, chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: Anion-transporting ATPase (TAIR:AT5G60730.1); Has 2945 Blast hits to 2509 proteins in 789 species: Archae - 176; Bacteria - 2046; Metazoa - 144; Fungi - 222; Plants - 103; Viruses - 0; Other Eukaryotes - 254 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G10350.2

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: cellular metal ion homeostasis, anion transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, anion-transporting (InterPro:IPR003348); BEST Arabidopsis thaliana protein match is: Anion-transporting ATPase (TAIR:AT5G60730.1).
Link: InterPro Scan - TAIR