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16-2395-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3988727 [Map]; Strand: c
      • AT1G11803.1 - [+] show detail - pseudogene, auxin responsive protein, blastp match of 74% identity and 1.2e-1...
        Distance: -697; Region: promoter
      • AT1G11806.1 - [+] show detail - pseudogene, hypothetical protein, likely a tandem duplication of the immediat...
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 16-2395-1 - 5-prime edge 
    GNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCC TTAATAAGGG TTCCACACCA TGAGCCTCCT 
    TCTCCTTTTG TGTATGACGC ATAACAATCA AGCCGTCACA GTGAAATATA 
    TATATTAGAT ATATCGTATT GATCAACTAT ATATATTTCC TTTAAAGATG 
    GATCAACGAA ATCGTTGTTG TGGATTCCTT GGAGATCAAG TCTCAGGGAA 
    CAAACCTTAG AATT

AT1G11803.1

Model type
Pseudogene
Computational Description
pseudogene, auxin responsive protein, blastp match of 74% identity and 1.2e-15 P-value to GP|3043536|dbj|BAA25434.1||AB000708 SAUR {Raphanus sativus}
Link
InterPro Scan - TAIR

AT1G11806.1

Model type
Pseudogene
Computational Description
pseudogene, hypothetical protein, likely a tandem duplication of the immediatly downstream hypothetical protein which has since degenerated.
Link
InterPro Scan - TAIR