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Mutant Lines
16-2529-1

16-2529-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 29067 [Map]; Strand: w
- AT4G00060.1 - [+] show detail - Nucleotidyltransferase family protein
  Distance: 196; Region: intergenic
- AT4G00070.1 - [+] show detail - RING/U-box superfamily protein
  Distance: 604; Region: intergenic

TATGTCTTGG AGAATCGAGG AGACACTCAT CGAGTTTAAA TGTGTGGTGG 
AGAGAATAAA AGTGTGCAGA TTTACTTAAA GAGTGAAGGG AAGGTGCTAT 
AAAAAAGGAT CTTGTTGGCC ACNGAGCTTC TTCCTTTTCG TCTTCTCCGC 
CGCACCCTTT GGGTCAACAG TTAAACCCTC TCCATTACGC GTGTGAGTAT 
ACACATATAA TATTCACATT ATATAAGATT ATGTTTCATA TAACGTAGAT 
CCTGCCTGTT CTATATACAA CAGATTAAAT GGTTTTGATA TGAGACGTTA 
GATACTTTAT TTCATCTGNT CAACTGCCTT AGCTAGAATA ATTTAATGAG 
TAACAAAAGC AAAATGGTCC TTTATGTTAG AATTGTGGTG AGTAACACAG 
CAGTTTCGAT GCTCTCACCC ATCATCCATA CTTTCAAATT TGGGAAGCCA 
TCAAAGTACC CCTGATCCCA CCACTTCCTC AGACTCGTGA GAGAGAATGG 
TCCGTGTGTT CTTCCTTTAG GGATTTCATA GAACAACAAC AGTTGCTCTG 
GATCATACTG TTGGTGATCG CGACTGTTCA TGTCCTCTTC ATCATCATCG 
CTCAGTTCAA TTGTCTCTAC TTGATATGAT TGAGTTTGAT GTTCATCATC 
GTCTGCTGTT TTCTGACACA CCCGGACACT GTTTCTTTGT CAATATCCAT 
GGTTTCACGC AGTTGACATG GAAGT

3 prime edge [+] show sequence

Chromosome: 4; Position: 28973 [Map]; Strand: w
- AT4G00060.1 - [+] show detail - Nucleotidyltransferase family protein
  Distance: 102; Region: intergenic
- AT4G00070.1 - [+] show detail - RING/U-box superfamily protein
  Distance: 698; Region: intergenic

ANNACATACC ACGACTNGNA TGTCCTANGT CCTNCCCGGA TNCTGNTGCC 
NAGTGGGCNT GTNNCGGATC TTNNAATNTA TAGAANTACG TAGGGTNNTG 
NCTANTNTCN GNCCACACAT CGNGATTATC CCAATNCGNT TGGCNGGACA 
ACTAGATNCA TATCGAGNAA CGGCATATGT ACNNCATCTA TTGGGATCNC 
ATTAACCTGG GCTACTACAT GNACTACTAT NNNCTTAACN CTGTGGAAAA 
GTTGTTGTTA TTTCTTCTAA AGTGCATGGA AACATATGGA GAGATTCGGA 
TTCCCAACTG TGGGGATGAA AAAGAAGAAG AGATCATTCT ATTGCCTTTC 
TCAATCCCAC TTACACGCCA ACATCATCAT TCCTGATCAA ATAATACATA 
TTAGTTTTTA AGTTTTCTGA AACTTGCAAA ATAGAGATAA TTTGTACATA 
CCTCGAATAT CACTGCCGTC CCATGCCTAG TAAACAATGC AAAAAGTCTT 
CTTCAAAATT AGTTTACTTC TGCAATTCTC TTTCAAATTA GCTAGTCATT 
GTTGTTGACT AACAACAACA CACCTCTCTA ATGGTCCCCA GTCTCCACAC 
TTGCTCTTCC TCTTTAAGCA CCGTCACCTA TATAATCATT TTTCCTACTT 
GCGCTTCAAA CACACCCNAC AACCTAGCAA GNTAAGTNAC CAACTAATGT 
TTNACNCAAA AAAACAAGGG GTTTTGGAGG ATTATCNGGC AATACCATGG 
GAGGGATTAT TG

AT4G00060.1

Model type: Protein coding
Short Description: Nucleotidyltransferase family protein
Computational Description: maternal effect embryo arrest 44 (MEE44); FUNCTIONS IN: nucleotidyltransferase activity; INVOLVED IN: embryo development ending in seed dormancy; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934), PAP/25A-associated (InterPro:IPR002058); BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT5G53770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00070.1

Model type: Protein coding
Short Description: RING/U-box superfamily protein
Computational Description: RING/U-box superfamily protein; BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G36950.1); Has 668 Blast hits to 668 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 32; Fungi - 45; Plants - 506; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink).
Link: InterPro Scan - TAIR