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16-2573-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16804959 [Map]; Strand: c
      • AT4G35310.1 - [+] show detail - calmodulin-domain protein kinase 5
        Distance: 0; Region: exon8 (3UTR)
    Flanking Genome Sequence: 16-2573-1 - 5-prime edge 
    TGTAGTCCGA TATGGATGAA GGGTCGTGAT CGTCTAGAAA GGAAGAAATA 
    GATTTTCAAA GTAAAAATGC TTAGAAATCA CACAACATAC AAAGACATTT 
    TTGTTTTTTT CAAATACAAG TGAACAAAGT TTAACAATGG CAGATGATGA 
    ACAAAGCTCA CTAACTTCAA CAATGGCCAT AATGAACAAA CAACAAAGAG 
    GTAAAGAAAA AACCTCCAAA ACTACTTGAC GATTAATCAC ACAGTCGTTA 
    AACAAAACTC GAACCATCCA CAGGTATGAA TCCGGTTTGG TCTTCTTTCA 
    TCGCCTTCTA GGTGGTGAGC ATTGAGGTTG TTGATTCCAT GAATAAGAAC 
    ATTTTCGCAG TCACGATCGC ACTAAAATAT TAAACACCGG GGAAAACAAC 
    CTCTACGCGT CTCTCATGCT AATGTTTAGA CTATTTCTCA TCGTCCTTCT 
    TCCAACACCA GCATTTCCCT TTTGCATCAT CTCCACAAAC TCACCATAAT 
    CAATCTTTCC ATCCTGTTCA GACCAACATA AGAACCGATA AGACTTTTTA 
    TCAGCTGATG CCTCGACATT AGCCTANCGA GGAATGTGGA ACAGAGTCAT 
    CATATAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16805027 [Map]; Strand: c
      • AT4G35310.1 - [+] show detail - calmodulin-domain protein kinase 5
        Distance: 32; Region: intergenic
      • AT4G35320.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 842; Region: intergenic
    Flanking Genome Sequence: 16-2573-1 - 3-prime edge 
    ANTTGAAAAC GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATG 
    ACTACACAAC TCGATATTGA ATAAATTTAT ATGAGAATAG TACCAATGGC 
    CTATGATGTG GAAGATGATG AGCTAGCAAG TCTCAATCAT GTAAATGAAA 
    GTGCTTTTTC TAAGTAATCT GTATTTAAAC TCAAATAAAA CCAAAACTCA 
    AAGCNTGTTC CAAGCAAATT ATTCATTGGC CACAATCTGT AATTTGGAAC 
    ATTATGCACC AAAACCATTT TTAATGTATT TTACATATAC AGGTTTTTTG 
    GTACTTCTCC TATACACATG GCATATTCAT ATTAACAAAA AATATTTATT 
    TTGGTGTCAC TTTTCATATT TTATTAGTGT AAAATAACCT CTTCTTAAGA 
    GTAACGTATG GCAATTTGGT CAGCTTTGTT ATTTAAAAAT TATATGTTAA 
    TTAGCTAAAA TACGATCATT TGTACCCAAA TTCTCTTAAT TTAAAACTAG 
    TCCGACTTGA AAGTAAAAGT TTAGTTTAAA CTATAATCAG AACAATAAAT 
    ATCAATACGC CACCGACGAT TTGCTGCCAC CGACAAATGT TTTGTCGGCC 
    ACACGCGTCT CAGTTTTATG GAACCGAACT CTCGTTAATA CTTTGCTTTT 
    TTACATACCA TTTTTGTTGA AAACCCCACA AAATGGGAAA ATTAATTCGG 
    NGAAATATTT TANATTTTTA GTTCTACTTG NATCATGAAA TTAAGAGTTC 
    TTCGACATAN ATNGTGTTAT CATCAATTAT CATTATGATC ATNGGGT

AT4G35310.1

Model type
Protein coding
Short Description
calmodulin-domain protein kinase 5
Curator Summary
calmodulin-domain protein kinase CDPK isoform 5 (CPK5)
Computational Description
calmodulin-domain protein kinase 5 (CPK5); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cytosol, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), EF-HAND 2 (InterPro:IPR018249), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Calcium-dependent protein kinase family protein (TAIR:AT2G17290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G35320.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR