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16-2607-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 3226910 [Map]; Strand: w
      • AT1G09920.1 - [+] show detail - TRAF-type zinc finger-related
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 16-2607-1 - 3-prime edge 
    AATTCGTGAT TCTGAAATTT CGTTTCTTCA GGTCTCTGAT CGTCCTGGTT 
    CTCCTCTGAT CTGTTATTTG CTTCGAAATA GAAGTTTGTT TCTCGTTTGA 
    CGATGGAGAC TGCGACTGGA GAAATCACCA TCGTCTGCAA CCACNTGGTT 
    TGTTTCCCCC CTAAAACCAT TGATTTCTCT GTCTGTGGTT GTTGACTTGT 
    TTCTATTTGA TCATAGTTTT TTTCGGCGAT TGGTTGCTTT CTCTTTGTTG 
    CGTAATCGTT CGATGATGAC TTGTGTAATT CGATATTCTG GACTCGAGGT 
    TATAACAATT TTGGAATTGA TCGGTGATTG CAATTGAGAA TATGTGTCAC 
    ATTAAAGATA CTCGTGAGCT GTATGATTCA GTTTGGTTCC ACGGTTTGTG 
    TCGGTGATTA CAAGTATAAC TAGGGATTCG ATGGATGGAT TAGTGATATA 
    CAATCTTTTT TTCTAAAAGA GTTCATTTTT ATTTGGTCAC CTACTAAAAG 
    GTTGATTCTT TTTTGTTACT TTGCTTAAAG TCCTTCATGA TAAATCTATT 
    GATTATGTAT CAGCTTCCTG GTGTCTGTAC AAGAGTTTTA TTGTCTTCTG 
    TTTATCGCAT GCTTTCTACN ATTTGTCTGA TGGTTTGCNT TANTTTCTAA 
    ACTTTCTAAA GATATATGTG GATGCTTGGN CTANTNATTG GTGGGTTGNA 
    TCNGCTGAGG CTGGAANTTT TGNATGCCCN ANNNC

AT1G09920.1

Model type
Protein coding
Short Description
TRAF-type zinc finger-related
Computational Description
TRAF-type zinc finger-related; BEST Arabidopsis thaliana protein match is: Ubiquitin fusion degradation UFD1 family protein (TAIR:AT4G15420.1); Has 897 Blast hits to 860 proteins in 162 species: Archae - 0; Bacteria - 0; Metazoa - 570; Fungi - 106; Plants - 68; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink).
Link
InterPro Scan - TAIR