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16-2613-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
fruit (PO:0009001)
  • abnormal (PATO:0000460)
    (Fruits (Siliques)::abnormal shape)
vascular leaf (PO:0009025)
  • wrinkled (PATO:0001810)
    (Leaves::rough surface)

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 1336502 [Map]; Strand: c
      • AT5G04660.1 - [+] show detail - cytochrome P450, family 77, subfamily A, polypeptide 4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-2613-1 - 5-prime edge 
    TTCCGATTTG ATCCTCTCGA TGAGTTTATC CATGGCGGAT TGTCTCAGTT 
    TCCCGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 1336618 [Map]; Strand: c
      • AT5G04660.1 - [+] show detail - cytochrome P450, family 77, subfamily A, polypeptide 4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-2613-1 - 3-prime edge 
    AATCGGAAGC TAGAGACAAC GACGGGCTAA TCTGGGTTCT TAAAAACGCA 
    AGATTCGCTG CGTTTTGTAT TCTCTTGGAA ATGTGTTTCG GAATCGAGAT 
    GGATGAAGAG ACAATCGAGA AGATGGATGA GATTTTGAAG ACGGTGTTAA 
    TGACTGTTGA TCCACGAATC GACGATTATC TTCCGATTCT TGCTCCGTTC 
    TTCTCTAAAG AGAGGAAACG AGCTCTCGAA GTTCGCCGTG AACAAGTCGA 
    TTACGTCGTC GGAGTTATCG AGAGACGACG GAGAGCGATT CAGAATCCAG 
    GATCTGATAA AACGGCGTCG TCTTTTTCAT ACTTAGATAC ACTCTTTGAT 
    TTAAAAATCG AAGGTCGTAA AACGACGCCG TCTAACCGAA GAGCTCGTGA 
    CGCTCTGCTC TGAGTTTCTT AACCGGTGGT ACGGATACCN ACGGGGGACC 
    GGCGATCCNA NACTCGATCA TCNGAGTGGG GGGATNCCCG CANCTTGATT 
    GCGAATTCCT TGANAATTCA ATTCTCNGGN TCTACCGAAT GAAAAATTAA 
    ANTCAACCNG GGGGGNANAN TGAANCCGNA GGGGNCCNNT NNAAAAANAA 
    ATTGNGGCCC AAAANGGGNC NTTTTTTAAN ANACCTTNCC CAGNCCCGGG 
    GGCCGNNTNG ACCCNNNCCC TGNCCCCCCN TANGGANNNG CCNCCNCNCN 
    GNNGANNNNN ANNNCN

AT5G04660.1

Model type
Protein coding
Short Description
cytochrome P450, family 77, subfamily A, polypeptide 4
Curator Summary
encodes a protein with cytochrome P450 domain
Computational Description
"cytochrome P450, family 77, subfamily A, polypeptide 4" (CYP77A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT3G10560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR