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16-2674-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 101200 [Map]; Strand: w
      • AT2G01150.1 - [+] show detail - RING-H2 finger protein 2B
        Distance: 0; Region: exon1 (3UTR)
      • AT2G01160.1 - [+] show detail - pre-tRNA
        Distance: -865; Region: promoter
    Flanking Genome Sequence: 16-2674-1 - 5-prime edge 
    ACTGCATCAT CTCATTGATT TTTATGTGAA GAAAGAAGAA AGCAAGAGAG 
    AAGAAGATGG AGGGAGGATG CTTTTTTATT TATCTTCCTT CTCCTCTTTC 
    CTTTTTAGGA GAAGATTCTT ATTTCTTACT ACAGAAGATT GATTCTTCTT 
    ATATATCTAT ATATATATAA CCTTCTATAT TTAGCTATGT TTTTGAGGAA 
    TCTCAGATCG GAAGAGAGGT CCTTTTGTTT TTCAGATTTC CACTCTGTAA 
    ATTCTTAGTA TGAAAAGAAT CAAATTAAGC TTCATGTATT CCTCCTTGGC 
    TGGTAAATTT TTTTGTAGTA TATTTGACAA AGCCTACTAC TATTTAATTT 
    TGCATTCTAG ACAATCTTGA AGCTTTACAC TATGGACTTT GTTCTGGTTT 
    CCACACTTTG CATTATTGCT ATTGACGTTA AAAGGTAGGT AACACAATTT 
    ATTGTGTCGA AATTCTACAA GAAAATATCA TAGCACCTCA TTTGGTAACA 
    AACTACACTT GTATTAATTT TGTTATTGTA AAGACTGTCT GTGTCTAAAG 
    TTTATCAAAA ATATCCTATA TGTAGTAATG TGAGTTGCAA ATTCGTCCAA 
    TCTTTTAGTA ACTAGTTGNA GCTCCGCTAA ATAGTTTTCG TTTTCTATAG 
    ATCCGCCCAT GATACCCCCA CATTTNAACT TGAATAAAGG TGGTCTAAGC 
    GATCAATACA GTNTTACAAG GGGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 101084 [Map]; Strand: w
      • AT2G01150.1 - [+] show detail - RING-H2 finger protein 2B
        Distance: 0; Region: exon1 (CDS)
      • AT2G01160.1 - [+] show detail - pre-tRNA
        Distance: -981; Region: promoter
    Flanking Genome Sequence: 16-2674-1 - 3-prime edge 
    GATGCAGTAG AGGTAGAGCG AAGAGGGAAG GCTGAGATCG ACGCATCACT 
    GCCATGTCCC TGATGATGAT GAGGTAGCAA TGGAGATC

AT2G01150.1

Model type
Protein coding
Short Description
RING-H2 finger protein 2B
Curator Summary
Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils.
Computational Description
RING-H2 finger protein 2B (RHA2B); CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING-H2 finger A2A (TAIR:AT1G15100.1); Has 8536 Blast hits to 8514 proteins in 269 species: Archae - 0; Bacteria - 0; Metazoa - 2151; Fungi - 713; Plants - 4534; Viruses - 16; Other Eukaryotes - 1122 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01160.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Asn (anticodon: GTT)
Link
InterPro Scan - TAIR