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16-2684-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18687 [Map]; Strand: c
      • AT4G00050.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 16-2684-1 - 5-prime edge 
    GTAACAGTAG ACGAATAACA TAAAACTTTT TTTGAAAAAT AAAATAATGG 
    TTGAGTGAAT CATTACACGT TCGGATTGGT TATGAATAGC AGCAGCTCTG 
    CTTCTCTTGG TTGAAACTGA TGATTTCCCT CCGGCTTTCT TCTCTTCTTC 
    GTCCTCCATC TATCGTTTTT CCTTAATTAT TATCATTTAC TTATAAAGCT 
    AGAGACATCA ATAACTAGAA CAAGTTAATA TATATGATGA CTTGCCTGTG 
    GGCGGCTGTG GCANACGGAG TCATGATCGT CGATTGTGTT ATCGTGCGAG 
    CCCATTGATG TTGAGGTGAA ACCTACGTCG TAAGTGTCCA TGGTCAGCCG 
    CTGACTCCCG CCGCCGCTCC ACTCCGGTGC CACTCTTGCT CGTTTTCCAC 
    CGGCCATGGT ACGACCATCG CTACATGACC CCACCCGGGT GGAGCCAACG 
    CCACCAGGCT TGCTCTGCTG CTCGTGTACT AGGTTGGAGC AAGGGACAAG 
    CGCGTCCATT GCCATCGCGG CCCTGGAGGA GCGATGATGG AACCACGGGA 
    CGAGCTCATC CGTGGGCTTA GGGTTAGGGA GGCGAGTAGC TTGGTCCACT 
    ATCGACTCTA ACGTTCCACC GGCGCCTGTG GAGTACTTGG TCNACGATGG 
    GAACCGATGG ACAAAACGGA TGTTGGACCC ACGAGCAAAC CTAAGGCCGA 
    CGGAANAAGG ATTCN

AT4G00050.1

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
unfertilized embryo sac 10 (UNE10); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: double fertilization forming a zygote and endosperm, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: phytochrome-interacting factor7 (TAIR:AT5G61270.1); Has 3766 Blast hits to 3760 proteins in 208 species: Archae - 0; Bacteria - 0; Metazoa - 365; Fungi - 50; Plants - 3342; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link
InterPro Scan - TAIR