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16-2733-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
petal (PO:0009032)
  • abnormal (PATO:0000460)
    (Flowers::petal)
stamen (PO:0009029)
  • abnormal (PATO:0000460)
    (Flowers::stamen)

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8595864 [Map]; Strand: c
      • AT1G24260.3 - [+] show detail - K-box region and MADS-box transcription factor family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT1G24260.1 - [+] show detail - K-box region and MADS-box transcription factor family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT1G24260.2 - [+] show detail - K-box region and MADS-box transcription factor family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 16-2733-1 - 5-prime edge 
    TATAGAATTG CTTGCAAGGA AAGAGAGAGA GAGAGAGATT GAGATATCTT 
    TTGGGAGAGG AGAAAGAAAA AGAAAATGGG AAGAGGGAGA GTAGAATTGA 
    AGAGGATAGA GAACAAGATC AATAGGCAAG TGACNGTTTG CAAAGAGAAG 
    GAATGGTCTT TTGAAGAAAG CATACGAGCT TTCAGTTCTA TGTGATGCAG 
    AAGTTGCTCT CATCATCTTC TCAAATAGAG GAAAGCTGTA CGAGTTTTGC 
    AGTAGTTCGA GGTATATATC TACTTTTGTA TATATATTAC TTATAACATA 
    AACATTTTAT ATACATATTA AGTNACACAA AAATGTCTTG TATGTATGGG 
    TCTCTCTGTG ATGTGTTGTT GTGTCGNACG TACGTGTTCT ATCATATCCT 
    TTTAAAAGAA GCANAGAGGA AAAAAAAATT TNGGGATACC CCAAATCTGT 
    ATCNTTTTNT AACAAGTTNG CTTTTTTGAT GTTCTTTTGG GTNTCTCTTT 
    GATNNCCATT TTTGNTTTNG ATTTTTTTTN TATTTCTCTT TACATCTATN 
    AAANNTTTTT TTTTTTTTTT TNTNGNNNAT NNNNNNGNNN NCTTNNNNNC 
    CNTTNTNNNN NNNAAAAACN NCTTTNTTNT TTNAAAAAAG GGGGAATTTN 
    TNTTGGGNNN NCNCNTTTTT TNNNAAA

AT1G24260.1

Model type
Protein coding
Short Description
K-box region and MADS-box transcription factor family protein
Curator Summary
Member of the MADs box transcription factor family. SEP3 is redundant with SEP1 and 2. Flowers of SEP1/2/3 triple mutants show a conversion of petals and stamens to sepals.SEP3 forms heterotetrameric complexes with other MADS box family members and binds to the CArG box motif.
Computational Description
SEPALLATA3 (SEP3); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7422 Blast hits to 7421 proteins in 918 species: Archae - 0; Bacteria - 2; Metazoa - 630; Fungi - 302; Plants - 6411; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G24260.2

Model type
Protein coding
Short Description
K-box region and MADS-box transcription factor family protein
Curator Summary
Member of the MADs box transcription factor family. SEP3 is redundant with SEP1 and 2. Flowers of SEP1/2/3 triple mutants show a conversion of petals and stamens to sepals.SEP3 forms heterotetrameric complexes with other MADS box family members and binds to the CArG box motif.
Computational Description
SEPALLATA3 (SEP3); FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT5G15800.1); Has 7376 Blast hits to 7375 proteins in 917 species: Archae - 0; Bacteria - 2; Metazoa - 632; Fungi - 302; Plants - 6358; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G24260.3

Model type
Protein coding
Short Description
K-box region and MADS-box transcription factor family protein
Curator Summary
Member of the MADs box transcription factor family. SEP3 is redundant with SEP1 and 2. Flowers of SEP1/2/3 triple mutants show a conversion of petals and stamens to sepals.SEP3 forms heterotetrameric complexes with other MADS box family members and binds to the CArG box motif.
Computational Description
SEPALLATA3 (SEP3); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT3G02310.1).
Link
InterPro Scan - TAIR