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16-2736-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 167508 [Map]; Strand: w
      • AT2G01350.1 - [+] show detail - quinolinate phoshoribosyltransferase
        Distance: -249; Region: promoter
      • AT2G01350.2 - [+] show detail - quinolinate phoshoribosyltransferase
        Distance: -261; Region: promoter
      • AT2G01350.3 - [+] show detail - quinolinate phoshoribosyltransferase
        Distance: -255; Region: promoter
      • AT2G01350.4 - [+] show detail - quinolinate phoshoribosyltransferase
        Distance: -261; Region: promoter
      • AT2G01360.1 - [+] show detail - pentatricopeptide (PPR) repeat-containing protein
        Distance: -489; Region: promoter
    Flanking Genome Sequence: 16-2736-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCA 
    CACAAACGAA ATCAGAAATA TATTACACAA CAGAAAACAC ACACAAGACA
    CAAGAGTATA TGTTTTGAGT TAGAACTCCG TACTTGTTAC ATGTTTGAGT
    GTTATGTTTT ATGTTGAATT TAACTAAAAT GCAGACGTTA GTATGGAATG
    GGCNTTCACA AATAAAAGCC CAATAGTATG TTTTTTTGGT AGGGAGCCCA
    ATAGTATGTT GGTTCACCCA AATATCATTT CTTTCTCTGA GAGCTGTTTA
    TTATATTCAC ACAAAGAAGA CCAACAAGAA ACAGAGTTGA ATCAGTTCTA
    CAATGATCTC TGTCTCTCGA TTCTTGTCGC CTCAATTCTA CGCAATTCCA
    AGGTTTTATC CGACAAAACC CAATCTTTTA AGTCTCTCCT TTGTTCATTT
    CTGTAATCGT GGCGACCAAA CTCAATCTCA ATTGTTTCAG GAGCTTCGTG
    AAAATGTCTG CTTCAGCGAC TCAAACGGCC GGAGAAGTTT CAATGGGGAT
    CAAGCCTCCT TCACACCCTA CTTACGATTT GAAAGCTGTT ATCAAACTAG
    CCCTAGATGA AGATGCTGGT CATACAGGTT CTCTCTTCAC CTTCTAAAGT
    TTCGATTTTT AATTTGTGAA ATTGAGTTGG TCAAAAATAT ATGATTTGAG
    TGAAGGAGAT GTAACGTGTA TGGCTACGAT ACCGTTTGAT ATGGAAGTGG
    AAGCTACCAG CCCNGG
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 167581 [Map]; Strand: w
      • AT2G01350.1 - [+] show detail - quinolinate phoshoribosyltransferase
        Distance: -322; Region: promoter
      • AT2G01350.2 - [+] show detail - quinolinate phoshoribosyltransferase
        Distance: -334; Region: promoter
      • AT2G01350.3 - [+] show detail - quinolinate phoshoribosyltransferase
        Distance: -328; Region: promoter
      • AT2G01350.4 - [+] show detail - quinolinate phoshoribosyltransferase
        Distance: -334; Region: promoter
      • AT2G01360.1 - [+] show detail - pentatricopeptide (PPR) repeat-containing protein
        Distance: -416; Region: promoter
    Flanking Genome Sequence: 16-2736-1 - 5-prime edge
    GTTGCTGATG GCTTGTCTTA GATTGTGGAG TTCATTCATG TCTTACTGAA 
    AACTCGAAGT GAAGCAATAG GAAAAGAACT AGCTAGCTCA GGAGCTATTA
    GAAGAGTCCT TGATCTGTTC TTTGAGTAAA TACACTCCCT GGATCGATTA
    CAAAATTTTA AACTGTTTGT TATTCCTGCT TGGCTAAATT CATCTTTCAA
    TTGTTTACTC CAACTATGCA GGTACCCGTA TGGTACACCT CTGATCAAAC
    ATTTATGGCT TCTTGTCACA CTATTGATGC AACTATCAGT CGTGCAGTTA
    CACTTTCAGA ATATTTGCTA GGTTGTCTTA GTAAAAGCAT AGAGATATAA
    TAGGAAACCG TCCAAACACT TTTGGGTTTG ACAATAGTTG GCACAGTATC
    TAGTACTGAT TTTGTCTCTT AATGACTACT AATAGTTGGC ACAGTATCTT
    GGTTATTTAC TTGGCTTCGT TGGCTCTTGA TTACAGCTTG GAAATGGGAA
    TT

AT2G01350.1

Model type
Protein coding
Short Description
quinolinate phoshoribosyltransferase
Curator Summary
At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description
quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5853 Blast hits to 5853 proteins in 1914 species: Archae - 184; Bacteria - 3582; Metazoa - 59; Fungi - 129; Plants - 57; Viruses - 0; Other Eukaryotes - 1842 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01350.2

Model type
Protein coding
Short Description
quinolinate phoshoribosyltransferase
Curator Summary
At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description
quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01350.3

Model type
Protein coding
Short Description
quinolinate phoshoribosyltransferase
Curator Summary
At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description
quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5825 Blast hits to 5825 proteins in 1916 species: Archae - 184; Bacteria - 3588; Metazoa - 59; Fungi - 124; Plants - 57; Viruses - 0; Other Eukaryotes - 1813 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01350.4

Model type
Protein coding
Short Description
quinolinate phoshoribosyltransferase
Curator Summary
At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description
quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5862 Blast hits to 5862 proteins in 1918 species: Archae - 184; Bacteria - 3596; Metazoa - 59; Fungi - 124; Plants - 57; Viruses - 0; Other Eukaryotes - 1842 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01360.1

Model type
Protein coding
Short Description
pentatricopeptide (PPR) repeat-containing protein
Computational Description
pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G01390.1); Has 425 Blast hits to 414 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 420; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR