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16-2761-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Anatomical entity
/structure development stage		 Phenotype
vascular leaf (PO:0009025)
  • abnormal (PATO:0000460)
    (Leaves::others)

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18402442 [Map]; Strand: w
      • AT4G39640.1 - [+] show detail - gamma-glutamyl transpeptidase 1
        Distance: 0; Region: exon6 (CDS)
      • AT4G39640.2 - [+] show detail - gamma-glutamyl transpeptidase 1
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 16-2761-1 - 3-prime edge 
    ATCTTGAGGA AAAAATGATT CAAGTAAACT TCCGTTGTCC CGGCAATAAT 
    GTTGGCTCCT CCGCTCGCAC CCACAGCGGC TTTCACTTTA CCGTCCTAAG 
    TAAACAAAAG AGGAGATAAC TATCTTTTAT ATCCCTAATT AAGAGTTTCG 
    TGTATCACAA GTAATAGGGT TTTTCCCCTT ACCTTGAGTA CAATGGTGGG 
    TGACATAGAG GACAAAGGTC GTTTTCCAGG ACGGATGAAG TTAGCTGGTG 
    CTGGTGGTGG AACATCTAAG TTACCGTTAG ATTTCATAGG GATTGAGAAA 
    TCGTCCATTT CGTTGTTCAG AACTATTCCT GTGCTCGGAG ATAGCATCAA 
    TGCCCCAAAG TAACCATTTA TTGTACTAGT CATAGACACA GCGTTCCTCT 
    CGCGGTCTAT GATCGATAAA TGACTTGTCC CGTGGTCGTC GATCTGATTC 
    CACCTATGAA TTGGAGATAG AAAGATCTAT AAATCATGAA TTTAAGAAGA 
    AATCTACGTG TTAACAAATA TTAGAACTTA CATGCCCCCG TAATATTTTG 
    GATCAAAAGT TTTTTGGTCG TTTATCTTGC TCTTCAAGTC TTTTGCAAAC 
    TTTGGCGACA ACATATCCGA AACAACCTTG GTAACATCAG TGAAATCTGG 
    ATC

AT4G39640.1

Model type
Protein coding
Short Description
gamma-glutamyl transpeptidase 1
Curator Summary
The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in vascular tissues (predominantly phloem) of leaves and is involved in the degradation of glutathione. The encoded enzyme also mitigates oxidative stress by metabolizing GSSG (oxidized form of GSH - glutathione) in the apoplast.
Computational Description
gamma-glutamyl transpeptidase 1 (GGT1); FUNCTIONS IN: gamma-glutamyltransferase activity, glutathione gamma-glutamylcysteinyltransferase activity; INVOLVED IN: response to oxidative stress, glutathione catabolic process; LOCATED IN: apoplast, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-glutamyltranspeptidase (InterPro:IPR000101); BEST Arabidopsis thaliana protein match is: gamma-glutamyl transpeptidase 2 (TAIR:AT4G39650.1); Has 9168 Blast hits to 9144 proteins in 1483 species: Archae - 86; Bacteria - 4247; Metazoa - 703; Fungi - 305; Plants - 110; Viruses - 1; Other Eukaryotes - 3716 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G39640.2

Model type
Protein coding
Short Description
gamma-glutamyl transpeptidase 1
Curator Summary
The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in vascular tissues (predominantly phloem) of leaves and is involved in the degradation of glutathione. The encoded enzyme also mitigates oxidative stress by metabolizing GSSG (oxidized form of GSH - glutathione) in the apoplast.
Computational Description
gamma-glutamyl transpeptidase 1 (GGT1); FUNCTIONS IN: gamma-glutamyltransferase activity, glutathione gamma-glutamylcysteinyltransferase activity; INVOLVED IN: response to oxidative stress, glutathione catabolic process; LOCATED IN: apoplast, plant-type cell wall; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-glutamyltranspeptidase (InterPro:IPR000101); BEST Arabidopsis thaliana protein match is: gamma-glutamyl transpeptidase 2 (TAIR:AT4G39650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR