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16-2780-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 9718024 [Map]; Strand: c
      • AT3G26511.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -4838; Region: intergenic
      • AT3G26520.1 - [+] show detail - tonoplast intrinsic protein 2
        Distance: 4419; Region: intergenic
    Flanking Genome Sequence: 16-2780-1 - 3-prime edge 
    ATTAGGATAA CGAGAGAGGC CATTGAGTTG ATCAAGTTGG ATCGACTTTG 
    CAAAATACAA GGCAAGTGTC CATTTGGCTT AGCACGACTG ACACGTGTAT 
    CCTACGAGGC ATTCCCTAAT TTAGGTGTCT TTTGTTGGTC CATACTATTT 
    TGGTAAAAAT GTAATCCCAA CTTCTTTTGT ATTCCGGTTA TGACTTATGT 
    GTGTGGGAAT CTTTGGATCA GTTTTAGATA AAAGTACATA TTCTTGTTGG 
    CTGTTTGCTT CTGCCGTTTA GAAAAAAAAA GAAAAAAAGG AGAAGGATCA 
    CCTTTTTTTT CTTTTGANAA GGATCAATTT TATAAATTTA GGATATGGTA 
    AAAAATATGA ATAAAAANAA GGNGACTTTT GACAATTAAA ACTACNCTGA 
    TNTAACANAA NATAACGAAC ATTGGTGATG ATGATAAGGT ATATACGTAG 
    TTCTATAACT AATATTTTAA TGCACAAAAT GAACATTATT AAAATAAATA 
    TTGGAATCTA NCAAGAAAGC ATTACTAATG TAAAATATGA ATTTATGATA 
    CATTATNTTT AAGGCATTTT GTATCGTATG ANAAACATTC AACGCTTCCA 
    CTATGACCCG GGGCATTGCC AAGGATTAAG CCCATACTAT TTTTTTGTTT 
    TTTTTGNGGG NAGNCCNATC CAACCAATAT ATTNCTTTTT TNGGTATGAA 
    TNANNNNCAA ATATTTACNT AACAAGTTGA GGGAAATGGC

AT3G26511.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G26520.1

Model type
Protein coding
Short Description
tonoplast intrinsic protein 2
Curator Summary
gamma tonoplast intrinsic protein 2 (TIP2). expressed throughout the plant and transcript level is increased upon NaCl or ABA treatments. NaCl stress-sensitive yeast mutant strains exhibit more resistance to salt when expressing this protein.
Computational Description
tonoplast intrinsic protein 2 (TIP2); FUNCTIONS IN: water channel activity; INVOLVED IN: response to salt stress, transport, defense response to bacterium, hydrogen peroxide transmembrane transport, water homeostasis; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: gamma tonoplast intrinsic protein (TAIR:AT2G36830.1); Has 10870 Blast hits to 10853 proteins in 2179 species: Archae - 81; Bacteria - 5139; Metazoa - 1484; Fungi - 429; Plants - 2489; Viruses - 0; Other Eukaryotes - 1248 (source: NCBI BLink).
Link
InterPro Scan - TAIR