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16-2782-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30377232 [Map]; Strand: w
      • AT1G80831.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 751; Region: intergenic
      • AT1G80840.1 - [+] show detail - WRKY DNA-binding protein 40
        Distance: -6459; Region: intergenic
    Flanking Genome Sequence: 16-2782-1 - 5-prime edge 
    ANNNNNNANN NNNNNNANNN NNNNNNNNNN NNNNCNTTTA NNACTAACAA 
    ANCCGGTTCT ACGATAACGG TCGGTACGGG ATTTTCCCAT CCTACTTTCA 
    TCCCNNATGA TTATATGAAA TGGTTTTTGC TNTANCNTGT TNGAAANGAC 
    CTATTTNTGG AAGNNGNCCT AAGGCNTTCT CGATNGNNTG AGCCNGAGCT 
    AAAGAACACT ACTATNGCTN TACGTAANAA NAGGAANGTN NATTNNGANN 
    NATGGAAANA ATAAAGANGA TNNCACATGN TTATNTANNC NGACTCATGA 
    NNATGCTTTT TATTACCTTT ANGCCGCACG ATCTAACGAT NTNAGCCNTN 
    GNATNGCGCT TANTATNNAN CNCANNAACC NNAAANACAC NACANANCNT 
    NCACAATGTC ATGACCACAT NAGANCTACC ATANTTNANN TGNNAGCNNT 
    TNTTGNNNGN ANGANNAGNT ANAGACNCAT GTTAATGGTG CNNNGNTGNG 
    CGGNCGNNAN GTNANTTGTN NNNATNAANG NNNNCAACCN ACNANNNNNG 
    NNNCNNTANC NCANANAANC GNANANNACA CTNNANAGCG CACCCNNNNG 
    NNNNNCCCCT NCCCNCNTAC NCNCNCCNNC CANCNNNANC NNNANCNGNG 
    NNGANACTCN CCNNTTACTN CATGNCNNAN TNGCNTTNCC NGCGNTGCGT 
    TANNANCCNT GTNCTNTANT NGCNNNCNNN GNNNNNTNGT NNTCNNNAAN 
    GGAAANNAAC NNCATCANNC NNCNTTGNAT TNGGNNGTTC NCCNACTNCN 
    GTTNAATNGN NGCGAGGNNA NTCCGCCACA NGNCCANNNN GTANGCGTCT 
    CNGTNCACTC CCGAATANNC ACCNANACNG CCNNCCCGNC AAANCACGNA 
    GNANAGANGA NAANAANCNT ANANCATN

AT1G80831.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80840.1

Model type
Protein coding
Short Description
WRKY DNA-binding protein 40
Curator Summary
Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.
Computational Description
WRKY DNA-binding protein 40 (WRKY40); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 18 (TAIR:AT4G31800.2); Has 3306 Blast hits to 2859 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3292; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link
InterPro Scan - TAIR