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16-2809-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1066178 [Map]; Strand: w
      • AT4G02420.1 - [+] show detail - Concanavalin A-like lectin protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-2809-1 - 5-prime edge 
    GTAGTGGAAA AAGACGATAC GGTACCGTTT GGAGAATCTT TGAACCGGAT 
    TGGTTTGGTA TAGAAGGCGT GACCGGTGCT CTGCATGGTT GTGTTGGTTA 
    GCTTTAAGAG ACCGTTTGGT GTGATGGTGG CAATTCCTAG GATGGATATA 
    TCTGTCGGTG GAGGACGGAA GCCATTGTAA GTGAAGTCGA TAATTTGGGA 
    AGAGGACTTT AGGGATTGCC AAAAGAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1066062 [Map]; Strand: w
      • AT4G02420.1 - [+] show detail - Concanavalin A-like lectin protein kinase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-2809-1 - 3-prime edge 
    TCCACTACCT TTGTCTTCGC TATTCACTCT CAGATACCCA TTGCACACGG 
    CATGGCCTTT GTCATCGCTC CTAACCCTCG CCTCCCATTC GGCAGCCCCT 
    TACAATACCT CGGTCTCTTC AATGTAACAA ACAACGGTAA CNGTTAGGAA 
    CCATGTATTC GCTGTTGAGC TTGACACGAT TATGAATATC GAGTTCAATG 
    ATACGAACAA TAACCATGTT GGAATCGATA TCAATAGCTT AAACTCGGTG 
    AAAAGTTCTC CTGCTGGATA CTGGGACAAG AACGATCAGT TTCACAATCT 
    GACTTTGATC AGTAGTAAAC GGATGCAGGT TTGGGTCGAT TACGATGGTC 
    CTACCCATCG AATCCATGTA ACGATGGCTC CATTCAGCGA GACTAAACCT 
    ACAAAACCGC TTGTTTCTAT CGTCAGAGAT CTGTCTTCGG TTCTTTTGCA 
    AGACATGTTT GTAGGGTTCT CGTCTGCGAC CGGTAATATT GTGTCCGAAA 
    TTTTTGTTCT TGGGTGGAGT TTTCGGGTGA ACGGGGAAGC TCANCCATTG 
    GCCTTATCGA AGCT

AT4G02420.1

Model type
Protein coding
Short Description
Concanavalin A-like lectin protein kinase family protein
Computational Description
Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT4G02410.1); Has 115117 Blast hits to 113792 proteins in 4484 species: Archae - 103; Bacteria - 12860; Metazoa - 42338; Fungi - 9449; Plants - 33733; Viruses - 419; Other Eukaryotes - 16215 (source: NCBI BLink).
Link
InterPro Scan - TAIR