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16-2810-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 6757160 [Map]; Strand: w
      • AT2G15470.1 - [+] show detail - Pectin lyase-like superfamily protein
        Distance: 1109; Region: intergenic
      • AT2G15480.1 - [+] show detail - UDP-glucosyl transferase 73B5
        Distance: -1521; Region: intergenic
    Flanking Genome Sequence: 16-2810-1 - 3-prime edge 
    GCTAGATGAG AGGTCTGAGA CTGCAGCTAT TTTTATTATG GCTTGCCGAG 
    AAACTCGAGC AGAGTGTTAG AACATTGATT AAAAGAATGA AGATGTGATG 
    GCAATTCCTG AAAGCTATCG TTGTATCAGA GGAAGCCGGT GCATCTATGC 
    ATGGATTCAC CTCCATCTTT TCACTGACAT CATGTGCAAG TGACATCTAA 
    GTTTAGCTGA TTTAGCAACT GTTTATGTTT GAAAGAAAAT AAGCTAAAGC 
    T

AT2G15470.1

Model type
Protein coding
Short Description
Pectin lyase-like superfamily protein
Computational Description
Pectin lyase-like superfamily protein; FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectin lyase fold (InterPro:IPR012334), Parallel beta-helix repeat (InterPro:IPR006626), Glycoside hydrolase, family 28 (InterPro:IPR000743); BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G15450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G15480.1

Model type
Protein coding
Short Description
UDP-glucosyl transferase 73B5
Computational Description
UDP-glucosyl transferase 73B5 (UGT73B5); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, UDP-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glycosyltransferase 73B4 (TAIR:AT2G15490.3); Has 6808 Blast hits to 6730 proteins in 439 species: Archae - 0; Bacteria - 297; Metazoa - 1215; Fungi - 23; Plants - 5119; Viruses - 118; Other Eukaryotes - 36 (source: NCBI BLink).
Link
InterPro Scan - TAIR