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16-2812-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19047168 [Map]; Strand: w
      • AT2G46400.1 - [+] show detail - WRKY DNA-binding protein 46
        Distance: -2342; Region: intergenic
      • AT2G46410.1 - [+] show detail - Homeodomain-like superfamily protein
        Distance: 2004; Region: intergenic
    Flanking Genome Sequence: 16-2812-1 - 3-prime edge
    ACGATACCAT AACATGTACG GAGTTATAAT TTTGATGTTT TTTTTTNGTN 
    TTTNGCTCTA AANCATTNNC NCCACAATCC TGTTAATNCA AAATAATCTT
    ATTAAATTAT GGTNGGNCNT NAAGGTAATA NCANCCNGCT CTNATTTNAC
    AGCNTTCTGT TAAGNGTNAA TCGNCTTTNT NGAGTTTTTC GNCAANCTAT
    NATTTTATCA TTTCNANGTN GATNTCTACC CNANGTAAAT AAGTTAAAAA
    CCATTCNGGT ANCGGGGGAC TAANGCNTNC NTTANCAAGG GAANGTNGTT
    TNCNTAACCA AAANCANATN ATAAAACNTC NTTNGATTTN AAATNAAGTT
    NAAANCATNT NGTNNAATTN ATAATCGTTA GTNGTTATCA ATNCAAANCA
    NNCTAAAACC ANCCCAAATT AAAATAATAA NCCCTTNNGG CCCTANTTAA
    TCATAAATAG NCCATNCATN CTNNAATAAT TATTNNCTAA GNGGGATTAA
    ANCTNTNNTT TTTATCNNAA AAGGCATGNG CATGTTTNTA CCCCNCNCGG
    GCATTTNNCT GAATTTAGTT TTAGTCATAA ATAATTCCCT GGACCAAACN
    CGTAAANANG CAACNCGTCG NANAAAAAAT ATTTNTCTTC AAAANAATTA
    TNTTNTTTTT NTNCTANTNT TANGGGATTA ATTNAGTTNA CCTCANCCCN
    ANNNCCNTTA AAATTNT

AT2G46400.1

Model type
Protein coding
Short Description
WRKY DNA-binding protein 46
Curator Summary
member of WRKY Transcription Factor; Group III
Computational Description
WRKY DNA-binding protein 46 (WRKY46); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G23810.1); Has 3385 Blast hits to 2951 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3370; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G46410.1

Model type
Protein coding
Short Description
Homeodomain-like superfamily protein
Curator Summary
Nuclear-localized R3-type MYB transcription factor. Positive regulator of hair-cell differentiation. Preferentially transcribed in hairless cells. Moves from atrichoblasts into trichoblast via plasmodesmata in a tissue-specific mode. N-terminus and part of the Myb domain are required for this movement, with W76 playing a crucial role. Capability to increase the size-exclusion limit of plasmodesmata. Regulated by WEREWOLF.
Computational Description
CAPRICE (CPC); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT5G53200.1); Has 2615 Blast hits to 2615 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2602; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink).
Link
InterPro Scan - TAIR