1. Home
  2. Mutant Lines
  3. 16-2857-1

16-2857-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4463574 [Map]; Strand: w
      • AT3G13650.1 - [+] show detail - Disease resistance-responsive (dirigent-like protein) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-2857-1 - 3-prime edge 
    ATCACTATCA TCAATAATGC AAGACATAAC AGCTGTACTC AACAGTAGCA 
    TCTCCTGACT TTTGATCAAA CCACATGGTC CGAGCCTCGA CATAACCTCT 
    AGCAAACCGG AAGAGTCCAC TTCCTCCAAT CACCGGCATC TCCCTAACCT 
    TGGTCAACAC AGCGTTCCGG CCAAGAATCG CGATCGAACT TCCGTTATAC 
    TTCCCTGTCT TGAACGCAAA GTTCATCACC ATAAGCGCAG ATGCATCACG 
    TTGACCAGTA GCAGCGTAGA TCCCTTGCGC TTGTCCCACT AAAGTCGAAT 
    T

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4463690 [Map]; Strand: w
      • AT3G13650.1 - [+] show detail - Disease resistance-responsive (dirigent-like protein) family protein
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: 16-2857-1 - 5-prime edge 
    ATAGTGATGA ATTATTATGC CTCTCTTTTT TAATGTTTGA TAAAATACTT 
    TTTGTTGGAT TTTGTCTGCT TAAAGTGATG GATGATTTTT GGGGGACTAT 
    GTCTTTTAAT AGATTTTGAT ACTTCTTTTT TTTTNGACGN NATTTTNGTT 
    TTNGNNTTNG CTACATCTNA CNCTACCGTT GGGNCTTAAT CTAANGGCCA 
    ACCNAGTNTT GAAANAGGCA ATNCCTTTNA AAAATATCTN AANGGCCTTA 
    AANNAACATN ATCGGCCCAT NGTTTTCCTT TTTAACAANC ATATGTNTNT 
    GTAACGTAGG GGATNGGGAA ATNCAACTNT NTNAANCCCN TCAAACAAAN 
    TAAAACTNGG ANCTNGGAAG TNTCATCAAA TAAAATAGNC ACCAAATAAA 
    AAAACTNTGC CANTTNCNTC CNGCCACGTT GTNGGTAGGC AACTNANCTC 
    AATTAAANAA TTGGTTTNCN ANCTACTATA ATATACNGTN TAACNCCCTC 
    TACAATNTTC ANTANCANNC TAAATGGGTN CAAATNCAAA TANTGGCCGA 
    GGAAAAAGGA CGGAAAAAAA GTCTCCTCAA AANAAAAAAA CAAATCAAAA 
    GTNGNGTTTG AACAAAAAAA AAAAAANNAA NTGACTNCCA NNTTNCAACA 
    AANAAAAAAT GGCTTTNCTT TNNANAAATT AANNNTCANG TTTC

AT3G13650.1

Model type
Protein coding
Short Description
Disease resistance-responsive (dirigent-like protein) family protein
Computational Description
Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G55210.2); Has 851 Blast hits to 850 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 851; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR