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Mutant Lines
16-2866-1

16-2866-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 3; Position: 18761136 [Map]; Strand: c
- AT3G50560.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
  Distance: 0; Region: exon5 (3UTR)

ATGCGATAAA TATATAGTGC CTGCTTCTCG AAGCTAAGTA GTTGTCATAG 
GACCTTTTTG AATTACATTA CAAACACAAG AATACCCATA CATACACATT 
TGGCTAAAAT AGCATTGAAT AAAATCATAA ACCAATCAAC TTGTATTTTT 
TTTTAAGTAC TAGCTANAAA TTTGGGTTTG ATGGTCGGAT ATCGAGTTCA 
TGTGTCCAAG CTCTCCGGTC TTGAACATGG AGATACCAAT ATGTTTGAGC 
CAATACATCA GGATC

5 prime edge [+] show sequence

Chromosome: 4; Position: 18191242 [Map]; Strand: w
- AT4G39040.2 - [+] show detail - RNA-binding CRS1 / YhbY (CRM) domain protein
  Distance: -686; Region: promoter
- AT4G39040.1 - [+] show detail - RNA-binding CRS1 / YhbY (CRM) domain protein
  Distance: -686; Region: promoter

TATCGCATAA CGGTATTTAT TTCATTCAAT AATCTTTTTG TTGCATAAAT 
TTACAAAAAT TTGAGTGTGT GATGTGTACA TATTTCTGAC GAATACTTTT 
TGTTGCATTA TCCAAATTTT TACATGTTCC CGAGCCGAGA GTCTAAGACG 
ACGATTTCCA AATTATTGTC GTTGCTGTTA TTATAATTGT TAATAATAGT 
AAGAATTATT ATTATTATTT AGGACACGCA AGATTCCACA TGATACTGCT 
TAAGCACTAC GTCGAGCTAA AATGAAATAC TCGATTTAAA TGAACTACCC 
CATTAGTTAC TTGAAGATGA AACGAAACAA TTTGGTTTTG GTCTTTTGGA 
TCATATAGTT AAACGTTATG TATCTTACTC AGTTTATTTT AATGAAGTTT 
GTTGTTTGGT ATATCAATTA GCCTTAGATG TCAAATCAAA ACGAAACAAA 
AACATGAAAA TTCAATTTGG CGTTAAATCA AAATAATAAT TAATATTCCA 
TGGATAATTA ATATACACTT AGCAAATTAC CGAAGTACCC TTGCTATCTC 
GTTGTCGTCA ATAATCAAAA TTACAGTATT AACCCAATTA AGAGCGTTTA 
GCGTCTACGT GTAAAGCGGT ATCAGGAGAA AGGAGCAGCG ATCACATGGG 
TGGCTTAAAT CTATATCCTC

AT3G50560.1

Model type: Protein coding
Short Description: NAD(P)-binding Rossmann-fold superfamily protein
Computational Description: NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G10050.1); Has 28315 Blast hits to 28305 proteins in 2489 species: Archae - 298; Bacteria - 21162; Metazoa - 1441; Fungi - 797; Plants - 407; Viruses - 0; Other Eukaryotes - 4210 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G39040.1

Model type: Protein coding
Short Description: RNA-binding CRS1 / YhbY (CRM) domain protein
Computational Description: RNA-binding CRS1 / YhbY (CRM) domain protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain protein (TAIR:AT2G21350.1); Has 7881 Blast hits to 5506 proteins in 1409 species: Archae - 38; Bacteria - 2320; Metazoa - 2599; Fungi - 454; Plants - 297; Viruses - 197; Other Eukaryotes - 1976 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G39040.2

Model type: Protein coding
Short Description: RNA-binding CRS1 / YhbY (CRM) domain protein
Computational Description: RNA-binding CRS1 / YhbY (CRM) domain protein; FUNCTIONS IN: RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA-binding, CRM domain (InterPro:IPR001890); BEST Arabidopsis thaliana protein match is: RNA-binding CRS1 / YhbY (CRM) domain protein (TAIR:AT2G21350.1); Has 7808 Blast hits to 5439 proteins in 1394 species: Archae - 38; Bacteria - 2293; Metazoa - 2592; Fungi - 448; Plants - 290; Viruses - 198; Other Eukaryotes - 1949 (source: NCBI BLink).
Link: InterPro Scan - TAIR