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16-2891-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 366034 [Map]; Strand: c
      • AT4G00872.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily protein
        Distance: -1298; Region: intergenic
      • AT4G00880.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: 339; Region: intergenic
    Flanking Genome Sequence: 16-2891-1 - 3-prime edge
    CTCCAGTGAA AGGCTTCCAC TTTTGAAGTT TTTATAAATT TTCATTGCCA 
    AATTTCATCT TTTGTAACTC ACTTTGGAGG AACTTCAAAA TCTTGTATCA
    CTTTATCTTT TTCTCTAACA TTGTTTGCTT CATAGCATAC AGTTGAGTCG
    A

AT4G00872.1

Model type
Protein coding
Short Description
Plant invertase/pectin methylesterase inhibitor superfamily protein
Computational Description
Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G56100.2); Has 34 Blast hits to 34 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00880.1

Model type
Protein coding
Short Description
SAUR-like auxin-responsive protein family
Computational Description
SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G46690.1); Has 1421 Blast hits to 1407 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1420; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR