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16-2943-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24129016 [Map]; Strand: c
      • AT5G59920.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-2943-1 - 3-prime edge 
    TATANCANGN AGGAGGTATT TTACCGACCG TTACCGACCG TTTTCATGAC 
    AACAACTATG CGTTCCCCTC TTATAGTTGT TCATAATGTG AGTTCAAGTT 
    GGACTTGACT TGTGGGATCA AACCATCACC GCCTGCTATC GAAAATCCGC 
    GTGTGTCATA ACCATCCANT CGTCTTCTTG AAGATACNAT AGGAGAAGGT 
    TCCTTGTGAC GTTATGCGAG GAGTCTATTG ATGGACCATC GTATTCATGT 
    CTTGAATGCG ATGTGNNCTT CCACGTGAAA TTGCGTAAAT CTCTCGGAAG 
    AGGTAAATCA TCCTTGTNAT NCTTTTCACC CTCTCAAGAT ATTCTCACCT 
    CAGACACTTT AGAATGATAT CGGTAAATGT TGTTGGTTAT GTGGAGATCG 
    GTTACGTGGA ANAATACTAN TNGGGCGTGT TTTTTTCATN GNGTGANTNN 
    CGGNGGAACA TNATGCNTNN GCTGTACCAG AAACCCACNA NCTCTNGTNN 
    ATTGACCATA TGAAGGACCC ACGAANCANC GCNNTCAGAT ANCTTTCNTA 
    GGATANCNNA NANGNTANGA GNCCGGGNCG GNTGNNGNAN GNGTGNNANT 
    ANGNGNGNNC CGCGGGGAGC GNCNGCGCGA GCGGGCNCCG NNAGGNCGGG 
    GNCNNANCNN NTACNAANAA TAGNAATAAG TANAGTNNGG GCGNGGNGNN 
    AANNNATTTG GTGAGCGGNG GGGNGGGNTA GGNGGGGGNA NGNGCGNNGN 
    GGAGNGNNNG GACGNGTGNN NNNAGCGCNC GGTNTTN

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24129016 [Map]; Strand: c
      • AT5G59920.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-2943-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT TTTGTCCACA CAAATCACAT AGACCATCTC 
    TTGACAAATT GGTGAGCAGG AGAGGATGTT GGGGGTGGAA ACTATGGTTG 
    ATGATCTCCA ATGGAGCCTC GCCACACTCC TTATGAAACC AAATATGGCA 
    GTAAGGTTCA TTGCAAAAAT AGCCGCCGTA CACGAGACCA TTTACATGGC 
    AGCCAGCACA TTCACGGATT ATAGATCGAG CTGAAGGAAA AAGAGGATGC 
    TCATGAATAG GTAGTAGCTT TCCTGCTATA ATGTCCATCT TTTTGATCGG 
    GTACAAGTGA AAAGATGTCA ATATGTATTA TGTATATGCT TCTGTAATAA 
    TAGCAAGTAC TGTTAAGAGT TTATTTGCAA AATGAACCAT CACCTATCTT 
    AAATAAGGTA ACCACACCCT TCTTGATTTG GATAATTTAT AAATATTAAA 
    TATTAAAAAA AAAGACCTCA AAGAAAAACA GCTACAATGA TGCGAATCTC 
    ATGGCTGAAA TGATTTGATA ATGTGAATCT CAAGGTATAA TAATAAGACA 
    AATTAGGGAC TCATATTTNT AAAAATTTAG GCCTCCCTCG TCAAACTAAG 
    GACCGGTCAT GCAGGNGCTT AAAGTCCCTT TTTAATTTCT CAAAAGCAGN 
    CTNAATTAAT NAATTTGNCA TCGATGANCG NGTCATGAAT AAATACAANG 
    CTT

AT5G59920.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Curator Summary
Isolated in a screen for UV-B insensitive mutants using a hypocotyl growth inhibition assay. Mutants are defective in a number of UV-B responses.
Computational Description
UV-B LIGHT INSENSITIVE 3 (ULI3); CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Zinc finger, PHD-type (InterPro:IPR001965), DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR