1. Home
  2. Mutant Lines
  3. 16-2948-1

16-2948-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15608711 [Map]; Strand: c
      • AT4G32330.1 - [+] show detail - TPX2 (targeting protein for Xklp2) protein family
        Distance: -201; Region: promoter
      • AT4G32330.2 - [+] show detail - TPX2 (targeting protein for Xklp2) protein family
        Distance: -201; Region: promoter
      • AT4G32330.3 - [+] show detail - TPX2 (targeting protein for Xklp2) protein family
        Distance: -325; Region: promoter
    Flanking Genome Sequence: 16-2948-1 - 5-prime edge 
    GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCGGGGGGG GGAAGTTTTA ATTAAAACTC TTTTAATTAT TATTATTTTC 
    CAGTATTAAT CTTTTAAATC CATATTAATT TTGCTGTTAG CCTGTAACAA 
    TCAAAAATCT GAATTANATT TTTTTTTATT TTTATACTAT AATTCTANAN 
    AGNGTACATT GCNATTTTCA ACCTTAAAAA TAAGCNCATG TTAACTCTTT 
    CACTCATCTT ATGTAGTAAA ATCGTATTAC AAGTTGAGTA AAATCCACTA 
    ACTGAATCTA NATGGGACAT TTCAAAAAAC ATATGAAAAG TTTAGGATTA 
    TAAAAAANAN ACATAAGTGG TTGGCAAAAA AAAAAAAAAA ACNTAAGGGG 
    GANCCAAGNC CAAATNAATN CTTGNTNTAA AAAAAAAACC CGGANTTAGG 
    GGGGATTTTG GATNTGGTNA AAAANNGCTT TTGNTTTAAN TCCNGGANAN 
    ANAGAGAGAG AGAGGGNCCT AACCCCTNTN ATTTTTTTAA NCAAACGGGA 
    ANANNTTTTN CNGNNGNGAC NNCANAAAAN TATNNGNNAN NCNTTTTNTN 
    AAGGGGAANC CANTATNTGN CCCNACAGGG GGNANAAANC CTNTNACCNT 
    TAAAANGGAA CCCNNTNNNT TCCCTGTNNG GGGAGNGGGN NGCNCCCTGG 
    NNTTGANANG NNTTNAACCC CCCNTNGNGA AANCGNAAAN NTTTTNTNCN 
    NNAAANAAAA CCCCCCCCNN TNNNNTANNN NNGNNNANAC ATNNANAA

AT4G32330.1

Model type
Protein coding
Short Description
TPX2 (targeting protein for Xklp2) protein family
Computational Description
TPX2 (targeting protein for Xklp2) protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT2G25480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G32330.2

Model type
Protein coding
Short Description
TPX2 (targeting protein for Xklp2) protein family
Computational Description
TPX2 (targeting protein for Xklp2) protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT2G25480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G32330.3

Model type
Protein coding
Short Description
TPX2 (targeting protein for Xklp2) protein family
Computational Description
TPX2 (targeting protein for Xklp2) protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xklp2 targeting protein (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT2G25480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR