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16-2952-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 57811 [Map]; Strand: c
      • AT2G01034.1 - [+] show detail - transposable element gene
        Distance: -9461; Region: intergenic
      • AT2G01037.1 - [+] show detail - transposable element gene
        Distance: 894; Region: intergenic
    Flanking Genome Sequence: 16-2952-1 - 3-prime edge 
    CTCGGATGAG ATATCGGATC GAAGGCTAGT TAGATTCCCT GGAAAGCTAA 
    CAACCGGGGC AATCCGTGAA CATATTATTC GATGCAAGAG TCGTTGCGAC 
    ATATCGGGAA ATCGGTCCTG AGGTTGACTG GTCTATTCAG ACGGATCTGT 
    GTTGAAACAG ACAGCATCGG CTTTACAAAT ACGGTGATAA CTCTCAGAAT 
    AGATATCCGA TTGAACCATG GTTAGACTCC CTGGAAAGCT GATCTCCGGG 
    GAAATCCGGG AACACGTTAC ACGTCACACC CGGTTCATTG GAACCTGACG 
    GGAAATCGCC GAGCAAATAA ACCGGATTGG ATTATCTTGG CTTGATGAGC 
    GTTCACCGAA AAACTTGGAT GAGTATATGC CAAGAAAGTT GTTTGGGGTC 
    CCCCTTCCTN GNCCCNCCAA TTGNTNGATT TCTGAAAATC NCCCAANAAA 
    ATTTNGTTAA AAGGGGGGNA ANAAAATTNC CTTAACNTNC TNNNCCTTTT 
    NGGGGNCCNN AANNTTTTTT GAAAAAAAAA AANNGGGGGG TNTNAAANAA 
    AAAAATTNGG GGNNTTNCCC CNAAAAAAAN NAAAAAANCN NGGGGNGTTT 
    NGTTNNTATN TTTGNNAANC CNCCCCGGGG GGGNNNATNC CGGGGGGGNT 
    NANAANANNA NNGNANNNC

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 57695 [Map]; Strand: c
      • AT2G01034.1 - [+] show detail - transposable element gene
        Distance: -9345; Region: intergenic
      • AT2G01037.1 - [+] show detail - transposable element gene
        Distance: 1010; Region: intergenic
    Flanking Genome Sequence: 16-2952-1 - 5-prime edge 
    CATCCGAGAA TTATCTCCAT GTTTCTGCAG AGGATGCAAT CTCGTTTGAC 
    ATAGAATCCT TTCTTAAGAA GACTAGTCAT CTTAGGGATC AATTCCCCCA 
    CAAGTCTCAA CGATTCTCGA AACTAGTAGC ACATCTATGG ATTTTCCAGC 
    GAGTCAGGTG TCCCTAGAAG CTGACCTCAC TTCCATCGGA GCTGTCTATC 
    GAATGTTATC CCTGCTTCTA TCCAGAAGAT GCGATCTTTA GAACTACGAA 
    TCCGTCTGAA TAATCCAGCT CACCACGGGG CCGATTTCCC GACAAATCAC 
    AGGGAATCTC GTAAGGGTTA ATACATCTAC GGATCGCCCA GAGAGTCGTC 
    TTTTCGGAGA AGTTGACCTC GCCTTAATCG AAGATATATG CTGAGAGATA 
    TAAACGTTTA CCTCAAGCAA GTGCAACCAG TCATGAGACC CAACTCTATA 
    AAACCAGTCA GCTTCGGGAT CGNTTTCCTT GAAAATCCTG ATGAACTAGG 
    AGTGATATAC CTATCTACAG ATCGCCCCAA GAGTCAGCTT TCTAAAGAAG 
    CCGACCTCGC CTGGATCCGA GCTGTCTATT ANGAGTTATC ATNACTNAGG 
    CTGNNCTNGA CACAANNTNC CCTGACNAAT CCGCAGCTGT NGGAACANCC 
    CACNTACGAA TGNNAACTCC AAGCGGACCG ANAAAGAAAC AAGANNCAAN 
    CTNNGCGA

AT2G01034.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family, has a 0. P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)
Link
InterPro Scan - TAIR

AT2G01037.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family, has a 5.0e-229 P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)
Link
InterPro Scan - TAIR