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16-2954-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8608784 [Map]; Strand: w
      • AT1G24270.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -21; Region: promoter
      • AT1G24280.1 - [+] show detail - glucose-6-phosphate dehydrogenase 3
        Distance: -661; Region: promoter
    Flanking Genome Sequence: 16-2954-1 - 3-prime edge 
    GTGATTTAGC TCATTTGTGA ATTGATTGAA TTTGTTAAAA AAAAATAAAA 
    AAATCATGCA TGTATATGAT GAGCGAGAGA CATAATAATG ATTAATGAGG 
    GTGAAATACA TAAACATGAA AAAAGGCTCT ATACTCTGTT TCCTCTTATC 
    TGCGAAAGCC ATTAAGGAAA GAAACAATAA TCGCAGCAAA GAAAACTCTC 
    TCCTCTGCTT CTCTCTCTCT CTCTATCTAN AAAANAAAGA TNCCTCAAAA 
    TCACCCATGA AAGTAATGAA NAANGGTAAA GTGCNCCCAT CTCCTCCTCT 
    TCCATCTTCT TCTTCTTNNA ANGGANANGA CTCTCTTTCT GTCTTTAAGC 
    T

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8608900 [Map]; Strand: w
      • AT1G24270.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -137; Region: promoter
      • AT1G24280.1 - [+] show detail - glucose-6-phosphate dehydrogenase 3
        Distance: -545; Region: promoter
    Flanking Genome Sequence: 16-2954-1 - 5-prime edge 
    TAAATCACAA TAGCTCCAGC GAAAATGCAT GATTTTTAAA ATGCTTCTTT 
    CAATGATATA GTTTTATTGT AACGGAAAAA TATTTAGCAA ATAGATTATA 
    TACTTACATG AGACAAGTAT AAATAATTAT TATAAACTTT ATTAAGTTTA 
    AGATCAAGGC TTTTGTGCAA TGTATCAATG AATGTTAGAT GTGATATGAT 
    CAATGTTTTA AACACATACA TAGTCATTGA TCGGAATGTG TGTTATTAGA 
    AATGCATGCC TAAGCCGATA GGGTTATCTA TGTTTGGTCT TGGACATTAT 
    AGCCAAATTT CGAATCTAAT TCTTCCAATA TTTTATTAAT TTTTTTTTTT 
    TGGCTTNGGN CCCCNCCTAG NTTGGCTTNN NANTTTNAAA ACCCCNNNAA 
    ANNNCNCCAN TNTNGTGNNG GCAAACCCTN NTTTAANAAA AANNNAAGGG 
    NCCCCTNGGN AANNNAAAAA AAAAAATTTT GGNAAANACC NTTTCCNTAA 
    CCCTTCCCAA NAAACCCCCC CAATTNGGGG CAAAAANNNA NCTTTTGGNN 
    AACGNNAAAN GGCCNAAANT TGGNNAATGG NCCTTNNAAN TTCCCNNTNN 
    NGNCAATGGG AAAATTNNNT NNGCTCCCAA ACCNNNTTNT TANCNANNNN 
    CGNNCCAAAT NCAAAAANGG NGGNNTTTTT TNGGGNCNTT ATNAAGGNNC 
    CCGGNTTTGG GNTG

AT1G24270.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13090.1); Has 84 Blast hits to 83 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G24280.1

Model type
Protein coding
Short Description
glucose-6-phosphate dehydrogenase 3
Curator Summary
Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root.
Computational Description
glucose-6-phosphate dehydrogenase 3 (G6PD3); CONTAINS InterPro DOMAIN/s: Glucose-6-phosphate dehydrogenase, C-terminal (InterPro:IPR022675), Glucose-6-phosphate dehydrogenase, active site (InterPro:IPR019796), NAD(P)-binding domain (InterPro:IPR016040), Glucose-6-phosphate dehydrogenase (InterPro:IPR001282), Glucose-6-phosphate dehydrogenase, NAD-binding (InterPro:IPR022674); BEST Arabidopsis thaliana protein match is: glucose-6-phosphate dehydrogenase 2 (TAIR:AT5G13110.1); Has 8421 Blast hits to 8407 proteins in 2362 species: Archae - 0; Bacteria - 5801; Metazoa - 904; Fungi - 180; Plants - 375; Viruses - 4; Other Eukaryotes - 1157 (source: NCBI BLink).
Link
InterPro Scan - TAIR