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Mutant Lines
16-2983-1

16-2983-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 586750 [Map]; Strand: w
- AT1G02690.1 - [+] show detail - importin alpha isoform 6
  Distance: 0; Region: exon10 (CDS)
- AT1G02690.2 - [+] show detail - importin alpha isoform 6
  Distance: 0; Region: exon10 (CDS)

CCTGTGTGAT CTCCTACCGT GTCCCGATCC AAGGGTTGTC ACAGTGACTT 
TGGAAGGTCT AGAAAACATT CTCAAAGTAG GTGAAGCCGA GAAGAATCTA 
GGCAACACAG GAAACGATAA TCTGTACGCG CAGATGATTG AAGACGCAGA 
TGGTTTGGAC AAGATTGAGA ATCTTCAGAG TCACGATAAT AATGAGATTT 
ATGAGAAAGC AGTCAAAATC CTGGAGTCGT ATTGGGCTGC AGATGACGAG 
GAGGAAGATA TTGGCGGTGT GGATGCTCCT GAGAATGTTC AGTCTTCCGG 
TTTCCAATTC GGAAACCAAA GTGGTAATGC TCCTACGGGT GGATTCAACT 
TTGGTTGAAG GTTTCTGTAG TATTCTCTCA GTTGCTTGAA CTTAAGAACA 
AAGGTCGCTC GTTGTCTTTT CTAAAAACAG TTTAGGTTTT TTTTTCTCTT 
TTTTGGGNCA NGTTTTNAGN GAATTTTGTA TTTTTANAAG TTNGGATATT 
TTGTTCTCTC CCNTTTAAGG CGGAAATNAA GNGTTTCACT ATCTGCTCTG 
NTATGNGCCT TTTTAAGNTC TCCTGNTNNA ACNNTNTTNA ANNNNNNGCN 
TNAANNGNCT NNTTNANNNT NNAGNNNGGG NC

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 586675 [Map]; Strand: w
  - AT1G02690.1 - [+] show detail - importin alpha isoform 6
    Distance: 0; Region: exon10 (CDS)
  - AT1G02690.2 - [+] show detail - importin alpha isoform 6
    Distance: 0; Region: exon10 (CDS)
Flanking Genome Sequence: 16-2983-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCGG 
GTCTGATGCA GCCTTGGCTC ACGAGAAACC TGCAAGGATA TAAGAGGTTC 
TATAACAAGA ATCACTGAAA AAAAAACTAA AAAGAGACAG AAACAATGAG 
ATTTGTTGTA CTTGATTTGG TCATGATTGC CACCAGAAGT TGCATTANAG 
ATTGCCCAAA CAGCTTCTTT CTTAATTTCG AATT
```

AT1G02690.1

Model type: Protein coding
Short Description: importin alpha isoform 6
Curator Summary: Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.
Computational Description: importin alpha isoform 6 (IMPA-6); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G02150.1); Has 4537 Blast hits to 3341 proteins in 295 species: Archae - 4; Bacteria - 37; Metazoa - 1783; Fungi - 593; Plants - 1355; Viruses - 0; Other Eukaryotes - 765 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G02690.2

Model type: Protein coding
Short Description: importin alpha isoform 6
Curator Summary: Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.
Computational Description: importin alpha isoform 6 (IMPA-6); FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Importin-alpha-like, importin-beta-binding domain (InterPro:IPR002652), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT4G02150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR