1. Home
  2. Mutant Lines
  3. 16-3040-1

16-3040-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 8605092 [Map]; Strand: w
      • AT4G15070.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-3040-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT TATGTCAATA GAGGTCCAAA TCTGTGTCCG 
    AGTTTGAATC CGGCTCCAAA GGCTTTATGT GCACATATCT GTCCGAGTTC 
    GAATCCAGCC TCCAAAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 8605085 [Map]; Strand: w
      • AT4G15070.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 16-3040-1 - 3-prime edge 
    TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCAA 
    TGAGTCTCGA TTCCTATCTT ATGTCTCTCG TTGGTGAAAC ATTGAGACTC 
    GAGCCCGAGC CGAAGTTCAT ATCACTCATC TATCAAATAT TCTCACTCGT 
    CATCTCTATG AATT

AT4G15070.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular signaling pathway; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G48320.1); Has 1561 Blast hits to 653 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 0; Plants - 1537; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Link
InterPro Scan - TAIR