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16-3062-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25799999 [Map]; Strand: c
      • AT5G64540.1 - [+] show detail - unknown protein; Has 2125 Blast hits to 1062 proteins in 182 species: Archae ...
        Distance: 0; Region: intron3 (CDS)
      • AT5G64540.3 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron4 (CDS)
      • AT5G64540.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 16-3062-1 - 5-prime edge 
    GNGCNNAAAC TAACAAAATC GGTTATACGA TAACGGTCGN TTNGNTGAAC 
    ATGATTCCAA GTATAGATGA TTGTGAACTT NCAATGCNTT GATCTATTCA 
    NGAGAAGCAA ATATTGTGTA TCATTGTCGC AACTACNCTC ACATGTTATG 
    TATTGAAAGT GTCTGNTGAG AGTTNTTTGG TGTTTTGCAG GAAACCACTC 
    GCTNTCAGCN ATCTTCTTCA GCTGGCAAGG AAAATATGCT GGCAAATAGN 
    CCTTGTACAC CANAGGTNTT TACTTTACAA CGCATTGNGT ATNANGATTT 
    CTGAAGAATC ATAAGTTTAT AACCAGTTCT CATTTGCTTT TATCTGTGTT 
    TATTAGGCTG CTAAACCTTT CAAACTGCAN GCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 1201059 [Map]; Strand: w
      • AT1G04430.1 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: exon8 (CDS)
      • AT1G04430.2 - [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
        Distance: 0; Region: exon8 (CDS)
    Flanking Genome Sequence: 16-3062-1 - 3-prime edge 
    CTGATGATAA CGAATCCCGT AGGTCTAAGA ATCCGATCCA TCTCGATTAG 
    TAGATCCTCT GCGCTGCATC CTTTGCTTTT AATGTCTGAA AATATA

AT1G04430.1

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G23300.1); Has 1231 Blast hits to 1208 proteins in 77 species: Archae - 0; Bacteria - 97; Metazoa - 0; Fungi - 0; Plants - 1110; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G04430.2

Model type
Protein coding
Short Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G23300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G64540.1

Model type
Protein coding
Computational Description
unknown protein; Has 2125 Blast hits to 1062 proteins in 182 species: Archae - 6; Bacteria - 116; Metazoa - 913; Fungi - 305; Plants - 50; Viruses - 20; Other Eukaryotes - 715 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G64540.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G64540.3

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 2125 Blast hits to 1062 proteins in 182 species: Archae - 6; Bacteria - 116; Metazoa - 913; Fungi - 305; Plants - 50; Viruses - 20; Other Eukaryotes - 715 (source: NCBI BLink).
Link
InterPro Scan - TAIR