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16-3069-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30132763 [Map]; Strand: w
      • AT1G80100.1 - [+] show detail - histidine phosphotransfer protein 6
        Distance: -963; Region: promoter
      • AT1G80100.2 - [+] show detail - histidine phosphotransfer protein 6
        Distance: -963; Region: promoter
    Flanking Genome Sequence: 16-3069-1 - 5-prime edge
    TATAGCGATG TGATACCAAT ATACCAATCA CCAAAGTTAT GAGAAAATCA 
    CGTAACCAGA GGTGTTGGTA CATACATTTT CTGTTAAAAA TAGTTAAGAG
    GACTTGTAAT CTTTTGTGTT TAACTATTGA TAATTTTTTA CTTTATTCGG
    TGAAACAATT TACGCATGTT TCTGTGTTGT GCTTGTGTTT CTTGTATTCT
    TCTTGTGTAT AGCTTTCCTT ATAAGAAAGA AAAAGAAGAA GATTAATTGA
    TTAGATCGAG AAAGAGAAAG GCCTTTTGAG ATAGAAATGG AGAAAGGATG
    GATTGAATTT GAAGCATAGA GAATAGCGAA CACTCACTGC AAAGTTAGTG
    GGAAAGTCGC GCGTCATACG AGGGAGCAAC AAAGTGTGGG CTTTTCTTTT
    ACAGTCTCAG AAACTAATGC ATGCTCACAT TTAAAAAAAA AAAAAAAAAA
    ANNNNTTTNG GGNTAAAAAA AAANGGGGGT NATTTNGNAA AAANNCNAGG
    GNCCNTNCCG GNTAANNAAA AAAANNGGGN NNANNNAAAA NTTTTNTTGT
    TNNCCCCCCN NAAAAAAAAA AAANTTTTTT TCCCCNCGGG GNAAAATAAA
    AAAANNAANN CCCCTTTTTT TGGGGGGAAA AAGNGNGGGG TTTTNTTTTA
    GGGGGNNGGG TTTNNTNNAA ANTTNTAAAG GGNAANGGNG GGGGAG

AT1G80100.1

Model type
Protein coding
Short Description
histidine phosphotransfer protein 6
Curator Summary
AHP6 lacks the conserved histidine residue (Asn83 in AHP6b), which is required for phosphotransfer, present in the other AHPs. AHP6 does not appear to have phosphotransfer activity. Acts as an inhibitor of cytokinin signaling by interacting with the phosphorelay machinery. Expressed in developing protoxylem and associated pericycle cell files. Negative regulator of cytokinin signaling. Expression is down-regulated by cytokinins. There are two alternatively spliced genes for this locus, AHP6a and AHP6b, differing in the length of the first exon. In ahp6-2 seedlings, only the AHP6a transcript is present. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).
Computational Description
histidine phosphotransfer protein 6 (HP6); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, phosphotransfer (Hpt) domain (InterPro:IPR008207); BEST Arabidopsis thaliana protein match is: histidine-containing phosphotransfer factor 5 (TAIR:AT1G03430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80100.2

Model type
Protein coding
Short Description
histidine phosphotransfer protein 6
Curator Summary
AHP6 lacks the conserved histidine residue (Asn83 in AHP6b), which is required for phosphotransfer, present in the other AHPs. AHP6 does not appear to have phosphotransfer activity. Acts as an inhibitor of cytokinin signaling by interacting with the phosphorelay machinery. Expressed in developing protoxylem and associated pericycle cell files. Negative regulator of cytokinin signaling. Expression is down-regulated by cytokinins. There are two alternatively spliced genes for this locus, AHP6a and AHP6b, differing in the length of the first exon. In ahp6-2 seedlings, only the AHP6a transcript is present. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).
Computational Description
histidine phosphotransfer protein 6 (HP6); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, phosphotransfer (Hpt) domain (InterPro:IPR008207); BEST Arabidopsis thaliana protein match is: histidine-containing phosphotransfer factor 5 (TAIR:AT1G03430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR