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16-3077-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 7139386 [Map]; Strand: w
      • AT1G20610.1 - [+] show detail - Cyclin B2;3
        Distance: -1605; Region: intergenic
      • AT1G20620.1 - [+] show detail - catalase 3
        Distance: -3681; Region: intergenic
    Flanking Genome Sequence: 16-3077-1 - 5-prime edge
    TTTGCGTTTC TATGTAGAAA CACAACAATA GCATTTTGTT TCCATTGATA 
    TAGAGACATT AAATAAATAT GATATGCCAT TAGGTTAAGT TTGAGATCAT
    TCTATAAGTT CTTGTTTCAG ATTTTTGTTA TTGGCATTTA AATTGACATG
    TATATCTTTT AGGTTGCATA AGTTCTCAGT CTCTTGTAAT TAATATCCGT
    TTAATGAACA CAACTGTGTT TTTTTCCATT ACAGGTTGGC CCAAAACTTA
    CCCACCAGAC TAGAGCCCAT TAGTATCTTA GATAATAGAT ATATTAGGCT
    TGGTGGGCCT GTGGCACAAA AATGTATTGG ACTTGTAAAA ATTGATAAAC
    TATGTATAAG GTCAATAGTT TTAAATTTCT AATAAGGGTA CCATTCTAAT
    AATAACCAAA CAATGTTTAA AAGGATTTGC ATTATTAGAT GATTAGTAAT
    TTATTTGATA TTTTGAAAAT CTATAAGAAA AGAAACAACA CAAAACCTTA
    AACCCACAGT ATAATGTACA TTAAAATCTA ATGAAAATGA GTAATCCTAC
    AAGTGAAATT TTATTTTCTT GAAAATATAA CTACNAAATT TGTNAATTTA
    AATCATAATT AGTNTCATGA GATTCACAAT TTGGTAAATT ATATACTAAC
    ATCATTATGA ATAACCAAAA GGATTGAATG AACTTAAAGC TAGNTAGGNC
    CCCATCT

AT1G20610.1

Model type
Protein coding
Short Description
Cyclin B2;3
Computational Description
Cyclin B2;3 (CYCB2;3); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: regulation of cell cycle; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN B2;4 (TAIR:AT1G76310.1); Has 4405 Blast hits to 4396 proteins in 374 species: Archae - 0; Bacteria - 7; Metazoa - 2039; Fungi - 549; Plants - 1150; Viruses - 30; Other Eukaryotes - 630 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G20620.1

Model type
Protein coding
Short Description
catalase 3
Curator Summary
Catalase, catalyzes the breakdown of hydrogen peroxide (H2O2) into water and oxygen.
Computational Description
catalase 3 (CAT3); FUNCTIONS IN: catalase activity, cobalt ion binding; INVOLVED IN: in 7 processes; LOCATED IN: in 11 components; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 2 (TAIR:AT4G35090.1); Has 6176 Blast hits to 6156 proteins in 1860 species: Archae - 22; Bacteria - 4351; Metazoa - 678; Fungi - 546; Plants - 456; Viruses - 0; Other Eukaryotes - 123 (source: NCBI BLink).
Link
InterPro Scan - TAIR