1. Home
  2. Mutant Lines
  3. 51-0574-1

51-0574-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18742720 [Map]; Strand: c
      • AT3G50500.1 - [+] show detail - SNF1-related protein kinase 2.2
        Distance: 0; Region: intron5 (CDS)
      • AT3G50500.2 - [+] show detail - SNF1-related protein kinase 2.2
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: 51-0574-1 - 5-prime edge 
    AGTCGTTCAT GCTCTTTACC TACATGTGTT TCCTACTAAG TGTCTGTTTT 
    TGCTTTGATT TCTGCTCAAG TATTAACTAT GCGTTTCTTT TCTTCAGTCT 
    TCTGTTCTTC ATTCCCAACC AAAGTCAACT GTTGGTACTC CTGCATACAT 
    TGCACCAGAG ATTCTTCTTC GACAGGAATA TGATGGCAAG GTAAGGCCAT 
    GAGACCAATT CCTCTGTCTA GAGTTAAAAC CAGCTTATCC ATATCACTGT 
    TTATACCATA AATATTCTTT GAGTTGTCCT CTGAAATAGC TGGTGTTACA 
    TTTTTCCA

AT3G50500.1

Model type
Protein coding
Short Description
SNF1-related protein kinase 2.2
Curator Summary
encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Enzyme involved in the ABA signaling during seed germination, dormancy and seedling growth.
Computational Description
SNF1-related protein kinase 2.2 (SNRK2.2); FUNCTIONS IN: protein kinase activity, kinase activity; INVOLVED IN: in 7 processes; LOCATED IN: cytosol, nucleus, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (TAIR:AT5G66880.1); Has 115487 Blast hits to 113731 proteins in 3342 species: Archae - 110; Bacteria - 13353; Metazoa - 42986; Fungi - 12252; Plants - 26670; Viruses - 490; Other Eukaryotes - 19626 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G50500.2

Model type
Protein coding
Short Description
SNF1-related protein kinase 2.2
Curator Summary
encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Enzyme involved in the ABA signaling during seed germination, dormancy and seedling growth.
Computational Description
SNF1-related protein kinase 2.2 (SNRK2.2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like, plant (InterPro:IPR015740); BEST Arabidopsis thaliana protein match is: sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 (TAIR:AT5G66880.1).
Link
InterPro Scan - TAIR