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51-0621-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15617748 [Map]; Strand: c
      • AT2G37180.1 - [+] show detail - Aquaporin-like superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 51-0621-2 - 5-prime edge 
    CNCGTCTGAA ATCCNTCAAG TCCTTCNACG TCNTTAGCCN TATGTGTNGA 
    TTGGATGTNT CTGGACNTTC TAAATAAGTG TGTNGCNTTG TGGTAGTTGT 
    AGGGCTTGTG GTTGTGAGAT GAAGAATAAA GGTTCTTTAT ATAGAGTGAG 
    CTCTTGGTCT ATGC

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15617864 [Map]; Strand: c
      • AT2G37180.1 - [+] show detail - Aquaporin-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 51-0621-2 - 3-prime edge 
    CAGACGAGAG ATTACGAAGA TCCTCCGCCA ACACCGTTTT TCGACGCAGA 
    GGAGCTTACC AAGTGGTCTT TATACAGAGC AGTCATCGCC GAGTTCGTAG 
    CCACTCTCCT CTTCTTGTAC GTCACCGTTT TAACTGTCAT TGGTTACAAG 
    ATTCAGTCCG ACACAAAAGC CGGTGGAGTT GACTGCGGCG GCGTCGGAAT 
    CCTTGGCATC GCGTGGGCTT TTGGTGGCAT GATCTTCATC CTTGTCTACT 
    GCACCGCCGG TATCTCAGGT ATCATATATC GAAACCGGTC CGGTTTATTA 
    CCCGGTTCAG AAAATTTAAC ATTTGTGGAC CTTTCAAATT TGTCCTTTGT 
    TTTGTAATTT ATTTGAAATT AACCCCAAGA ACTTTGTAGG TGGTCACATA 
    AACCCTGCGG TGACGTTTGG TT

AT2G37180.1

Model type
Protein coding
Short Description
Aquaporin-like superfamily protein
Curator Summary
a member of the plasma membrane intrinsic protein PIP2. functions as aquaporin and is involved in dessication.
Computational Description
RESPONSIVE TO DESICCATION 28 (RD28); FUNCTIONS IN: water channel activity; INVOLVED IN: response to desiccation, response to water deprivation, transport, response to osmotic stress; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: shoot, root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 2 (TAIR:AT2G37170.1); Has 10809 Blast hits to 10795 proteins in 2215 species: Archae - 81; Bacteria - 5139; Metazoa - 1474; Fungi - 455; Plants - 2518; Viruses - 2; Other Eukaryotes - 1140 (source: NCBI BLink).
Link
InterPro Scan - TAIR