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51-0837-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 328375 [Map]; Strand: c
      • AT3G01970.1 - [+] show detail - WRKY DNA-binding protein 45
        Distance: -963; Region: promoter
      • AT3G01980.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 0; Region: intron2 (CDS)
      • AT3G01980.3 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 0; Region: exon2 (CDS)
      • AT3G01980.4 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 0; Region: intron3 (CDS)
      • AT3G01980.2 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 51-0837-1 - 3-prime edge 
    CCTTTCCANC ACCAGATANN GANTGTTNAN TTNANGANTG ANCAACACAC 
    AAGAGCATCA AAGGCANGGT AGTGAAAAAC AAGAAGCAAA TTAAACCTTG 
    GTAGGTATAA GAGTTGAGAA AAGCATCGAA ATGGCCGGAA AGTTCCCATG 
    CCTTTTGGAC AGCGGCATGA AAAGCANCTT CNNANTCAGA TTCCATGTCG 
    AGTGCTATAA CATCGGCAGG GAAGGCTCCC TCAATGGAAT CTCTAATCTT 
    GTCTACAATG CTCCTTAGGG AACCCTCATT TCCCATCATT ACCAACCTAG 
    CAACAGTACA TTGCATTTTT TGAAGGTTAA CTATAGACAC CAAAGTCAAC 
    CACAACACAA ATCGGGGCTA GAAGAAGAAA

AT3G01970.1

Model type
Protein coding
Short Description
WRKY DNA-binding protein 45
Curator Summary
member of WRKY Transcription Factor; Group I
Computational Description
WRKY DNA-binding protein 45 (WRKY45); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 75 (TAIR:AT5G13080.1); Has 3497 Blast hits to 3049 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3482; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G01980.1

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G55290.2); Has 52487 Blast hits to 52467 proteins in 3078 species: Archae - 436; Bacteria - 38325; Metazoa - 1234; Fungi - 2083; Plants - 1279; Viruses - 0; Other Eukaryotes - 9130 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G01980.2

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G46170.1); Has 521 Blast hits to 521 proteins in 203 species: Archae - 4; Bacteria - 319; Metazoa - 7; Fungi - 24; Plants - 123; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G01980.3

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G55290.1); Has 42855 Blast hits to 42845 proteins in 2927 species: Archae - 336; Bacteria - 31027; Metazoa - 1001; Fungi - 1707; Plants - 1092; Viruses - 0; Other Eukaryotes - 7692 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G01980.4

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G55290.2); Has 52487 Blast hits to 52467 proteins in 3078 species: Archae - 436; Bacteria - 38325; Metazoa - 1234; Fungi - 2083; Plants - 1279; Viruses - 0; Other Eukaryotes - 9130 (source: NCBI BLink).
Link
InterPro Scan - TAIR