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51-0844-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30054032 [Map]; Strand: c
      • AT1G79900.1 - [+] show detail - Mitochondrial substrate carrier family protein
        Distance: -96; Region: promoter
      • AT1G79910.1 - [+] show detail - Regulator of Vps4 activity in the MVB pathway protein
        Distance: -852; Region: promoter
      • AT1G79910.2 - [+] show detail - Regulator of Vps4 activity in the MVB pathway protein
        Distance: -852; Region: promoter
    Flanking Genome Sequence: 51-0844-1 - 3-prime edge 
    CCAATTCTTT ATTATTCAAG AGATCCTCAT TCATTTGATA ACTCTNTGAT 
    ACTCCACTAG GCGGAANGAC GGCTGATGTC TCNCCCGACC GGATCGTATC 
    GGTATCTATG AT

AT1G79900.1

Model type
Protein coding
Short Description
Mitochondrial substrate carrier family protein
Curator Summary
encodes a mitochondrial ornithine transporter that exports ornithine from the mitochondria to the cytosol
Computational Description
BAC2; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G46800.1); Has 25782 Blast hits to 14100 proteins in 457 species: Archae - 0; Bacteria - 6; Metazoa - 10775; Fungi - 7497; Plants - 4679; Viruses - 6; Other Eukaryotes - 2819 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G79910.1

Model type
Protein coding
Short Description
Regulator of Vps4 activity in the MVB pathway protein
Computational Description
Regulator of Vps4 activity in the MVB pathway protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061); BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT4G32350.1); Has 592 Blast hits to 592 proteins in 162 species: Archae - 0; Bacteria - 3; Metazoa - 147; Fungi - 112; Plants - 281; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G79910.2

Model type
Protein coding
Short Description
Regulator of Vps4 activity in the MVB pathway protein
Computational Description
Regulator of Vps4 activity in the MVB pathway protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061); BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT1G52315.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR