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51-1171-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 226654 [Map]; Strand: w
      • AT5G01590.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon5 (3UTR)
      • AT5G01595.1 - [+] show detail - other RNA
        Distance: -370; Region: promoter
    Flanking Genome Sequence: 51-1171-1 - 3-prime edge 
    TCANCCACAC ACCGACATTG CTGGCGAAGA ATTCATAAAC AACAGGATGT 
    TTTGCTTGTT GTCATCCAAG ACTTTGCTTC AATCTTTTTT GGAGTTGCTA 
    TCGTCGTCCT CCTCCTCTTC CTCCTCCTCA TCTTCATCGG TACGGCCGGA 
    ATAATGCTTC AGGTCCTCTT CTCTCAGCTC CTCCTCTNTC CGCGTCATCC 
    TCCGAGCAAN CCTTTTGTCA NAATCTTTCT GAACTNTGTC CATTATAGTG 
    TCNAAACCCG GGACTGTCCT CTCCAGCTTC TGGCCTACTC GAACACTC

AT5G01590.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 59 proteins in 31 species: Archae - 0; Bacteria - 20; Metazoa - 1; Fungi - 2; Plants - 33; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G01595.1

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT5G01600
Link
InterPro Scan - TAIR