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51-1214-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 266117 [Map]; Strand: w
      • AT5G01710.1 - [+] show detail - methyltransferases
        Distance: -484; Region: promoter
      • AT5G01712.1 - [+] show detail - conserved peptide upstream open reading frame 48
        Distance: -484; Region: promoter
    Flanking Genome Sequence: 51-1214-1 - 3-prime edge 
    TATGTACGGT CAACCATGTT TGGTCAAGTC GTCACATAAT AAAACTAATA 
    CTTATTTTTA TTCAGTAACA GCAATGTATC ACGTATGCAA ACCATTCATA 
    CACTAATAAT AAGTGAATCA TATAATATGT CGTAAATCTT GTTGATCAGT 
    TTATCAGTGA TGACCAATAA CATTTACTAT TTCCTCTAAT TTCGACATCT 
    ATTGATTATC TATAGCTTTA AGCTGCATTG GATCCACCAA TAAACTTTAA 
    CTTTAAATTT CTCTCCAGAA AAAAAGAAAG ATAGGTTAAA GAATTCAGAT 
    AATTAATGAA AGGAAAGGAT CGAACAATAC GAGTA

AT5G01710.1

Model type
Protein coding
Short Description
methyltransferases
Computational Description
methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Methyltransferase FkbM (InterPro:IPR006342), Methyltransferase type 11 (InterPro:IPR013216); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53400.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G01712.1

Model type
Protein coding
Short Description
conserved peptide upstream open reading frame 48
Curator Summary
Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF48 represents a conserved upstream opening reading frame relative to major ORF AT5G01710.1
Computational Description
conserved peptide upstream open reading frame 48 (CPuORF48); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR