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51-1422-3

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 329937 [Map]; Strand: w
      • AT3G01980.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: -906; Region: promoter
      • AT3G01980.3 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: -906; Region: promoter
      • AT3G01980.4 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: -906; Region: promoter
      • AT3G01980.2 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
        Distance: -906; Region: promoter
      • AT3G01990.1 - [+] show detail - ACT domain repeat 6
        Distance: -200; Region: promoter
    Flanking Genome Sequence: 51-1422-3 - 5-prime edge 
    CNTNTGAACN TTAGNGAGAA GTCTACCTCN ANANNACGAA TGATCTATNA 
    TACTAGTAAA TACCACATCT TGCTTGAGAA GGAGAATATA ATCCCCTTTA 
    TGATCATCAA ATTGACCCCA AATCTTCACC CGACTTTTGG TAGTATTCGA 
    ACAATTATAA CANAATCTTA AAGTTGCTGT GCCCGTGCCA CGTCATCTCT 
    AAGAATCTTT AGTGGCACGT GCTCGATCAA CTAATGAAAA CAAGGTTCGG 
    TTCCGGTGGC CTACCATTTT TATCCTCCTT CAACTTCCCT CTCCCTCTCT 
    CTTTTAGGAA TTTTCCTCAG AAATTGGAGG ACTCACA

AT3G01980.1

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G55290.2); Has 52487 Blast hits to 52467 proteins in 3078 species: Archae - 436; Bacteria - 38325; Metazoa - 1234; Fungi - 2083; Plants - 1279; Viruses - 0; Other Eukaryotes - 9130 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G01980.2

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G46170.1); Has 521 Blast hits to 521 proteins in 203 species: Archae - 4; Bacteria - 319; Metazoa - 7; Fungi - 24; Plants - 123; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G01980.3

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G55290.1); Has 42855 Blast hits to 42845 proteins in 2927 species: Archae - 336; Bacteria - 31027; Metazoa - 1001; Fungi - 1707; Plants - 1092; Viruses - 0; Other Eukaryotes - 7692 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G01980.4

Model type
Protein coding
Short Description
NAD(P)-binding Rossmann-fold superfamily protein
Computational Description
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G55290.2); Has 52487 Blast hits to 52467 proteins in 3078 species: Archae - 436; Bacteria - 38325; Metazoa - 1234; Fungi - 2083; Plants - 1279; Viruses - 0; Other Eukaryotes - 9130 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G01990.1

Model type
Protein coding
Short Description
ACT domain repeat 6
Curator Summary
Member of a small family of ACT domain containing proteins in Arabidopsis. ACT domains are involved in amino acid binding.
Computational Description
ACT domain repeat 6 (ACR6); FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, carpel, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain repeat 4 (TAIR:AT1G69040.1); Has 3173 Blast hits to 1993 proteins in 619 species: Archae - 0; Bacteria - 2121; Metazoa - 0; Fungi - 0; Plants - 561; Viruses - 0; Other Eukaryotes - 491 (source: NCBI BLink).
Link
InterPro Scan - TAIR