1. Home
  2. Mutant Lines
  3. 51-1558-1

51-1558-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 12880956 [Map]; Strand: c
      • AT2G30170.1 - [+] show detail - Protein phosphatase 2C family protein
        Distance: 0; Region: intron3 (CDS)
      • AT2G30170.2 - [+] show detail - Protein phosphatase 2C family protein
        Distance: 0; Region: intron3 (CDS)
      • AT2G30180.1 - [+] show detail - pre-tRNA
        Distance: -635; Region: promoter
    Flanking Genome Sequence: 51-1558-1 - 5-prime edge 
    TCTCCGGGTA ANCTTTAGCT TTTGGTTATN CNAACTNTTG ANTNTCTTTG 
    TGGGTTGATC TNAATGTTGA TAAACTTTAT ATTCNTTTCT GTCTCAGTTG 
    GGCTGAACAA GATATTGATC CTTCCTTGTT CTCTAAAGAA CTTATGGCTA 
    ACNCTTCTNN TTTAGTTGAT GACCAAGAGG TCAGATATGA TCCTGGTTTT 
    CTCATTGACA AAGCTCATAC CGCAACTACT TCTAGAGGTT CTGCCACAAT 
    GTGAGTGAGA TTTGATTGTT ATTCNCTTC

AT2G30170.1

Model type
Protein coding
Short Description
Protein phosphatase 2C family protein
Computational Description
Protein phosphatase 2C family protein; FUNCTIONS IN: phosphoprotein phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT4G16580.1); Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G30170.2

Model type
Protein coding
Short Description
Protein phosphatase 2C family protein
Computational Description
Protein phosphatase 2C family protein; FUNCTIONS IN: phosphoprotein phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Sporulation stage II, protein E C-terminal (InterPro:IPR010822); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G66720.1); Has 893 Blast hits to 891 proteins in 246 species: Archae - 2; Bacteria - 86; Metazoa - 181; Fungi - 226; Plants - 226; Viruses - 0; Other Eukaryotes - 172 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G30180.1

Model type
Pre-tRNA
Short Description
pre-tRNA
Computational Description
tRNA-Gly (anticodon: GCC)
Link
InterPro Scan - TAIR