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51-1752-3

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 450543 [Map]; Strand: c
      • AT3G02270.1 - [+] show detail - Trimeric LpxA-like enzyme
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 51-1752-3 - 5-prime edge 
    GTTCTTGTTA ATGGATGTAT TGTTAGTAAC ATGCCCCTGA CGCAGCTGAT 
    TCAAGAACAC AGAGATAGAA AAAAGAAAGA TGAGAAAGCT ATCATGACTA 
    TGGTTATCAG ACAGTCACTC ATCACCGATC ATCAACTCTT CATCGCTGTA 
    AATCCTTTAA CAAAACAGCT TCTTTATTAC GATGAGGACA ACATCTGCTT 
    CGATAAATCA TTGCTGGATC GTAATCCATC TGTTTTGTTA TGTAGTGATA 
    TGCAGGATTG TTACATTGAC ATATGTTCTC TTGAGGTGCT TAGTCTATTT 
    GTGGATAACT TCGATTACCA ACA

AT3G02270.1

Model type
Protein coding
Short Description
Trimeric LpxA-like enzyme
Computational Description
Trimeric LpxA-like enzyme; FUNCTIONS IN: binding, transferase activity, translation initiation factor activity, nucleotidyltransferase activity; INVOLVED IN: biosynthetic process, regulation of translational initiation; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), eIF4-gamma/eIF5/eIF2-epsilon (InterPro:IPR003307), Armadillo-type fold (InterPro:IPR016024), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: Trimeric LpxA-like enzyme (TAIR:AT2G34970.1); Has 3426 Blast hits to 3381 proteins in 843 species: Archae - 306; Bacteria - 1238; Metazoa - 499; Fungi - 246; Plants - 265; Viruses - 3; Other Eukaryotes - 869 (source: NCBI BLink).
Link
InterPro Scan - TAIR