1. Home
  2. Mutant Lines
  3. 51-1786-1

51-1786-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 600397 [Map]; Strand: c
      • AT5G02660.1 - [+] show detail - Protein with domains of unknown function (DUF627 and DUF629)
        Distance: -102; Region: promoter
    Flanking Genome Sequence: 51-1786-1 - 5-prime edge 
    ACTTTTNAGT ANAGAAANAG CGTGAACGAT GATGAATATA TATCATCAGA 
    GGAAACACAA AAAGACGTTA GTCACATCAG CGCTGACACG TGGCCTGGCT 
    CGCTCTTGCT TATTTTGAAT TTAAAGTCCT CGTTTCTTTT TTCTTGAAAA 
    TAAAATACAA AAAATACAGA GGAATCTGAT CAAAAACGGA CTAAGTTTAC 
    ATGGGAAAAT TGAATGTTCA TAGAGTGTTG TTCCTGTTTC ATGGTTCTAC 
    TAATGAGTGA TTCTTCGCCT TGGTCATTGT GAAATTGAAT TATACATTAG 
    ATAAGGGTTT TCATGCTCTC TAGTTTAGTT TTGTGTTTC

AT5G02660.1

Model type
Protein coding
Short Description
Protein with domains of unknown function (DUF627 and DUF629)
Computational Description
FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Protein of unknown function DUF627 (InterPro:IPR006866), Zinc finger, C2H2-type (InterPro:IPR007087), Protein of unknown function DUF629 (InterPro:IPR006865); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase-related protein (TAIR:AT1G65200.1); Has 108 Blast hits to 108 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR