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51-1861-3

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 331785 [Map]; Strand: c
      • AT4G00760.1 - [+] show detail - pseudo-response regulator 8
        Distance: 0; Region: intron1 (5UTR)
      • AT4G00770.1 - [+] show detail - unknown protein; Has 127 Blast hits to 120 proteins in 33 species: Archae - 0...
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 51-1861-3 - 5-prime edge 
    TATGCATGTA GTAGTCAAAG TATGTGATTA ATTAATGTTA TAAGTACGAG 
    TTTCTATTTC TCTTAATATA GTATTCTTAC CTCAGGTCCC ACTTCAGTGT 
    CGGCTAGTAT TACTGCTGTG CAAGAATCTT CGCCGACGCA GTGTAAGTTG 
    TTTTTAACAC TCTGTTTTTC ACCGCAATCC TCAACGTTAC TTCCCCATGA 
    TGATGGTAAA AACTCCGATG TAAAATCCAA GTCAGACCAA CTGCTGCAGG 
    ATGTGCCGCT GGTGGTGGAG GATCCTGTGG TTGTTGTCGT GTTCTTGGTT 
    GTGTACTGAT GAGGTTCAAA ATGTGATATG TCCTCATGCA GGTCCTTAGA 
    TGAGTGCCAT CGCACGATGT CTTTGACCCG AATA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 331900 [Map]; Strand: c
      • AT4G00760.1 - [+] show detail - pseudo-response regulator 8
        Distance: 0; Region: intron1 (5UTR)
      • AT4G00770.1 - [+] show detail - unknown protein; Has 127 Blast hits to 120 proteins in 33 species: Archae - 0...
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 51-1861-3 - 3-prime edge 
    ATCGATATTT TAACCACGTG ATCTATGCTA CTCCACAAGA ACGAAAGAAA 
    TAAAGTGACA ATGTGATCTG AGAATAGAGA TCTTATGGGT TGACTTTGCT 
    TCAACCGTAG GGTCGCCCAT GCTGTCTCTG AATGCACGTG

AT4G00760.1

Model type
Protein coding
Short Description
pseudo-response regulator 8
Curator Summary
Encodes a response-regulator like protein.
Computational Description
pseudo-response regulator 8 (APRR8); FUNCTIONS IN: two-component response regulator activity, transcription regulator activity; INVOLVED IN: regulation of transcription, DNA-dependent, two-component signal transduction system (phosphorelay); LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 2 (TAIR:AT4G16110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00770.1

Model type
Protein coding
Computational Description
unknown protein; Has 127 Blast hits to 120 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 8; Plants - 62; Viruses - 3; Other Eukaryotes - 46 (source: NCBI BLink).
Link
InterPro Scan - TAIR