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51-2054-3

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3118200 [Map]; Strand: w
      • AT3G10113.1 - [+] show detail - Homeodomain-like superfamily protein
        Distance: 0; Region: exon5 (CDS)
    Flanking Genome Sequence: 51-2054-3 - 5-prime edge 
    NGTGGTANGG CCNGAACCCA CTTGCATTTA CAGGATTACA AGATCCTTGT 
    TTTTCTAAGG AGCTTAACCG TTTCCATGAA GAACTTATCG GCTCTGCACT 
    CTTCTCCAAG TTCTCAGATG CTTCTGTAAC CGAGCCAAAT GCATTAGAAC 
    CAGTACAAAA CGTTTCCCAT ACNCCAAGAG ATAAATTAGT GTCAACTAGC 
    ATCCCTGAGT AGTGATTCTC CTGACACGTC ATTTGTTTAA GATCATCATC 
    ATTGTAAGAG GATGGTTTGT GAGATTCTTC CGCGACAAGG ACAATCTTCC 
    CGAAAAGAGT ANTGCTTGAN ATGGGTGTTG AACCAATGTC AGAATCATCT 
    TTGAAAGGTT GC

AT3G10113.1

Model type
Protein coding
Short Description
Homeodomain-like superfamily protein
Computational Description
Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G18330.2); Has 1478 Blast hits to 1458 proteins in 141 species: Archae - 0; Bacteria - 0; Metazoa - 111; Fungi - 27; Plants - 1117; Viruses - 0; Other Eukaryotes - 223 (source: NCBI BLink).
Link
InterPro Scan - TAIR