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51-2336-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 850520 [Map]; Strand: w
      • AT3G03550.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 51-2336-1 - 5-prime edge 
    ATTGAACTCC GAACCAGAAA ATTCGAAATT CCGTTTGTTT GATTCGCCGC 
    CGATCCTGAC GGCGGAGGCG TCTTCTCTCC TTCCCCTTCT TCTACCCACC 
    GAGAAGTTCC TACACCCGCT GATTCTTCGT CNTCTTCAAT CTCCCTTANT 
    NTATCTGCGA TCGATACCAC ACCGCCGCCT GAGTTTAACG ACGCTGATCT 
    CCGCTCTTCT CCGTCTATGA T

AT3G03550.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to karrikin; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G17600.1); Has 9886 Blast hits to 9859 proteins in 306 species: Archae - 0; Bacteria - 2; Metazoa - 2318; Fungi - 804; Plants - 5150; Viruses - 98; Other Eukaryotes - 1514 (source: NCBI BLink).
Link
InterPro Scan - TAIR